Rv0006 - c.351C>T
Drug resistance types
73 Sensitive
6 RR-TB
102 HR-TB
19 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
78 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 5 |
| 116 | |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.2.1 | 17 |
| lineage4.9 | 33 |
| lineage4 | 55 |
| lineage2.2.1.1 | 3 |
| lineage2.2.1 | 8 |
| lineage2.2 | 3 |
| lineage2 | 2 |
| lineage4.8 | 4 |
| La1.8.1 | 3 |
| lineage4.9;La3 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.1 | 3 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2 | 3 |
| lineage5.2 | 2 |
| lineage4.9.1 | 1 |
| lineage1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3 | 1 |
| La1.2 | 2 |
| La1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 284 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9787165 | Other | lineage6 | None | SRR10808805 | Sensitive | None | ERR9787197 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1172234 | Other | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1172951 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1172857 | MDR-TB | None | SRR1173629 | Other | None | SRR1173400 | Other | None | SRR1173778 | Other | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR13861266 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | SRR22250196 | Sensitive | lineage1.2.2.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR1750908 | Sensitive | lineage4 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675571 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR5341313 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341400 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341330 | HR-TB | None | SRR6045503 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2693239 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None | ERR2679270 | HR-TB | lineage4.1.2 | None | ERR2660539 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6045952 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046397 | Other | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046802 | Other | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6511621 | HR-TB | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR6325442 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4831117 | HR-TB | None | SRR6789626 | Other | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR294248 | HR-TB | None | ERR5311081 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR5311099 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323043 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063883 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373947 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797083 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4407463 | HR-TB | None | ERR4024991 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797264 | Sensitive | None | ERR4799025 | Pre-XDR-TB | None | ERR4798099 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6198317 | Other | La1.2 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6358979 | Other | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736867 | HR-TB | None | ERR6866639 | Other | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | SRR22249614 | Sensitive | lineage1.2.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9634265 | Sensitive | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9786440 | Other | lineage4.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None |
|---|
