Rv0006 - c.351C>T


Drug resistance types
43 Sensitive 10 RR-TB 60 HR-TB 31 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 93 Other
lineage Counts
lineage Count
lineage4.9;lineage7 2
lineage3.1 1
lineage4.3.4.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La1.7;lineage4.9;lineage7 3
lineage2.2.1.1 3
lineage2.2.1 5
La3;lineage4.9 7
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage4.1.2.1 11
lineage4.9 63
lineage4.6.3;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
9
lineage2.1 2
M.canetti;lineage4.9 3
lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage1.2.2.2 3
La1.8.1 3
lineage6.1.3 1
M.canetti;lineage2.1;lineage4.9 23
lineage4.1;lineage4.9 1
lineage4.6.1.1 1
La3;lineage4.8 1
lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 6
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 5
M.canetti;lineage1 1
La1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage4.8 4
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
lineage1.1 1
lineage5.2 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.1;lineage4.8 2
lineage4.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 1
lineage6.3.1 1
lineage4.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage4.9 1
lineage4.1.1.3 1
lineage4 3
lineage4.2.2.2 1
lineage3 3
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.1.1.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.2.BCG 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage2;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.3.2.1 1
lineage4.3.4.2 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9.1 1
spoligotype Counts
spoligotype Count
None 241
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR28351442 HR-TB lineage3.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
ERR212001 HR-TB None
SRR12142341 HR-TB lineage2.1 None
SRR6044815 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR22250196 Sensitive lineage1.2.2.2 None
ERR3797023 HR-TB La1.8.1 None
ERR9787165 Other lineage6.1.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR22249614 Sensitive lineage1.2.2.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2446566 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR13861381 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6789626 Other None
ERR13265833 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4797184 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR1196546 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6044942 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR373947 Other lineage4.9 None
SRR13861332 Other lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR3675585 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2514692 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR349264 Sensitive lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR1162864 Other lineage4.1.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR13861266 Sensitive lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR3283040 HR-TB lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR29096882 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR3797015 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
SRR15014682 MDR-TB lineage4.8 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2513470 Other lineage4.2.2.2 None
ERR3797063 Sensitive La3;lineage4.9 None
SRR29096394 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6511621 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR29096530 Sensitive lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR369160 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR9786645 Other lineage4.6.2.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1238558 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR6045233 Other M.canetti;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR9787197 Other None
SRR28044873 Pre-XDR-TB lineage3 None
ERR369159 Sensitive lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR9786604 Other None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
SRR13861510 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR28351347 Other lineage3 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR6358979 Other lineage4.9 None
SRR6045053 Other lineage4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR28044974 Sensitive lineage1.2.2.2 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR29096710 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283030 HR-TB lineage4.9 None
SRR29096709 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR29231298 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1791696 Other La1.8.1 None
ERR9634265 Sensitive lineage4.3.4.2 None
ERR3273109 HR-TB lineage4 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR11466062 Sensitive lineage4.9.1 None
ERR2660539 Other lineage4.9 None