Rv2245 - c.678C>G
Drug resistance types
51 Sensitive
5 RR-TB
99 HR-TB
16 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 16 |
| lineage4.9 | 29 |
| 86 | |
| lineage4 | 48 |
| lineage4.1.2.1 | 10 |
| lineage1.1 | 1 |
| lineage5.2 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.1 | 2 |
| lineage3.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.8 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1 | 1 |
| La1.8.1 | 4 |
| lineage4;lineage3.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| lineage2.2 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage3 | 3 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 241 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5709967 | MDR-TB | lineage2.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046046 | Other | None | ERR278594 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6325442 | HR-TB | None | ERR4830353 | Other | None | SRR6046397 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR3275196 | Other | lineage2.2.1 | nl | SRR6325447 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6511621 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831117 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR5311099 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535086 | Other | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323038 | HR-TB | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323041 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1034634 | HR-TB | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3468544 | HR-TB | None | ERR3797015 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797083 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797082 | Other | lineage4.9 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR6866410 | Sensitive | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR8976043 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9119669 | HR-TB | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR10808805 | Sensitive | None | SRR1158918 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173777 | Other | lineage4 | None | SRR13861288 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861399 | Other | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR1640750 | HR-TB | None | SRR13861646 | Other | lineage4.9 | None | SRR16370251 | Sensitive | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19451491 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR8692898 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675383 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR212034 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212121 | HR-TB | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675571 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816656 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR245758 | Other | lineage4.9.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818929 | HR-TB | None | SRR5341453 | Sensitive | None | ERR4820268 | Sensitive | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341293 | HR-TB | lineage4 | None | ERR2514535 | Sensitive | lineage3 | gb | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341469 | Other | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2517528 | Other | lineage3 | nl | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None |
|---|
