Rv3596c - c.271_272delAGinsTC
Drug resistance types
19 Sensitive
1 RR-TB
12 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 24 |
| lineage2.2.1 | 4 |
| lineage4.8;lineage4.9 | 2 |
| La1.8.1 | 1 |
| La3;lineage4.9 | 6 |
| lineage2.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| 1 | |
| lineage4 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.3.2.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.8 | 1 |
| La1;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675585 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR3675246 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6044835 | Other | lineage4.9 | None |
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