Rv3246c - p.Asp124Glu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
37 Sensitive
2 RR-TB
34 HR-TB
10 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 66 |
| lineage4.3.3 | 4 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.2.1 | 8 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.8 | 1 |
| lineage4 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage7 | 1 |
| 1 | |
| La1.8.1 | 1 |
| La1.7;lineage4.9 | 3 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.9;lineage9 | 1 |
| La1.7.1 | 1 |
| lineage1.1.2 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.1.2 | 1 |
| lineage6.1.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 110 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR181824 | HR-TB | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR6832533 | HR-TB | lineage4.3.3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR6831998 | MDR-TB | lineage4.3.3 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR29681473 | Pre-XDR-TB | lineage4.3.3 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR176651 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341467 | Other | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR29538886 | MDR-TB | lineage4.3.3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR161037 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
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