lineage | Count |
---|---|
lineage2.2.1 | 30 |
lineage3 | 35 |
lineage4.3.4.1;lineage4.9 | 1 |
lineage2.2.1.1 | 3 |
lineage4.4.1.1 | 9 |
lineage4.3.3 | 12 |
lineage4.1.2.1 | 2 |
lineage4.3.4.1 | 6 |
lineage1.2.2.2 | 2 |
lineage4.3.2.1 | 6 |
lineage2.2.2 | 3 |
lineage4.1.2 | 3 |
lineage4.2.2 | 2 |
lineage3.1.2 | 2 |
lineage4.1.1.1 | 2 |
lineage1.1.2 | 1 |
lineage4.3.4.2 | 3 |
lineage4.3.4.2.1;lineage4.4.1.1 | 1 |
lineage4.1.3 | 1 |
lineage4.4.2 | 2 |
spoligotype | Count |
---|---|
None | 126 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR25827604 | MDR-TB | lineage2.2.1 | None |
SRR1181238 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2514729 | MDR-TB | lineage3 | None |
ERR4799249 | Pre-XDR-TB | lineage3 | in |
SRR9971144 | RR-TB | lineage2.2.1 | None |
SRR29289300 | XDR-TB | lineage2.2.1 | None |
SRR14088367 | MDR-TB | lineage3 | None |
SRR14088385 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3287777 | MDR-TB | lineage4.3.4.1;lineage4.9 | None |
ERR4831479 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4831621 | MDR-TB | lineage2.2.1.1 | None |
SRR29289242 | Pre-XDR-TB | lineage3 | None |
ERR11776039 | MDR-TB | lineage4.4.1.1 | None |
ERR11774853 | MDR-TB | lineage4.4.1.1 | None |
SRR16370488 | MDR-TB | lineage4.3.3 | None |
ERR1034582 | Pre-XDR-TB | lineage3 | pk |
ERR1034616 | Pre-XDR-TB | lineage3 | pk |
SAMEA2534798 | MDR-TB | lineage2.2.1 | uz |
ERR4831480 | Pre-XDR-TB | lineage3 | None |
ERR3148205 | RR-TB | lineage4.1.2.1 | mx |
SRR28393257 | MDR-TB | lineage4.3.4.1 | None |
ERR4831482 | MDR-TB | lineage3 | None |
ERR13266804 | MDR-TB | lineage1.2.2.2 | None |
SRR7070136 | MDR-TB | lineage3 | None |
ERR1034587 | Pre-XDR-TB | lineage3 | pk |
ERR1034615 | Pre-XDR-TB | lineage3 | pk |
ERR9029846 | MDR-TB | lineage4.3.4.1 | None |
SRR11349172 | RR-TB | lineage4.3.2.1 | None |
ERR13243569 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1181385 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488860 | MDR-TB | lineage4.1.2 | None |
ERR11082018 | MDR-TB | lineage2.2.1 | None |
SRR16370507 | MDR-TB | lineage4.3.4.1 | None |
SAMN02585958 | Pre-XDR-TB | lineage2.2.1 | za |
SRR7585395 | MDR-TB | lineage1.2.2.2 | in |
SRR10397102 | MDR-TB | lineage4.3.3 | None |
ERR4811297 | Pre-XDR-TB | lineage2.2.1 | cn |
ERR4020189 | MDR-TB | lineage4.4.1.1 | None |
ERR4799787 | MDR-TB | lineage3 | None |
ERR11138626 | Pre-XDR-TB | lineage2.2.1 | None |
SAMEA5569971 | MDR-TB | lineage4.3.4.1 | None |
SRR29914416 | MDR-TB | lineage4.2.2 | None |
SRR10315689 | RR-TB | lineage4.3.2.1 | None |
ERR11774854 | MDR-TB | lineage4.4.1.1 | None |
SRR18213913 | MDR-TB | lineage3 | None |
ERR2510573 | MDR-TB | lineage3 | pk |
ERR4829142 | Pre-XDR-TB | lineage2.2.1 | pk |
SRR18714876 | MDR-TB | lineage2.2.1 | None |
ERR2510285 | MDR-TB | lineage3 | pk |
ERR2510581 | MDR-TB | lineage3 | pk |
ERR2510582 | MDR-TB | lineage3 | pk |
ERR4831478 | MDR-TB | lineage3 | pk |
SRR29289348 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29289349 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6964546 | Pre-XDR-TB | lineage3 | None |
SRR28393275 | MDR-TB | lineage4.3.4.1 | None |
ERR11775001 | RR-TB | lineage4.3.2.1 | None |
SRR6152899 | MDR-TB | lineage2.2.2 | ca |
ERR11774856 | MDR-TB | lineage4.4.1.1 | None |
ERR2514983 | MDR-TB | lineage3 | gb |
ERR4798283 | Pre-XDR-TB | lineage3.1.2 | in |
ERR4831477 | MDR-TB | lineage3 | None |
SRR9971372 | MDR-TB | lineage4.1.1.1 | None |
ERR11489057 | MDR-TB | lineage4.1.2 | None |
ERR2653130 | MDR-TB | lineage4.4.1.1 | None |
ERR688014 | Pre-XDR-TB | lineage3 | None |
SRR29772657 | MDR-TB | lineage1.1.2 | None |
SRR10315691 | RR-TB | lineage4.3.2.1 | None |
SRR10525360 | MDR-TB | lineage4.1.2.1 | None |
SRR28044648 | MDR-TB | lineage3 | None |
SRR9971229 | RR-TB | lineage4.3.2.1 | None |
SRR25207358 | MDR-TB | lineage2.2.1 | None |
ERR7737791 | MDR-TB | lineage2.2.1.1 | None |
ERR9119741 | MDR-TB | lineage4.3.4.2 | None |
ERR5865927 | MDR-TB | lineage4.3.3 | None |
ERR4020182 | MDR-TB | lineage4.3.4.2.1;lineage4.4.1.1 | None |
SRR29093788 | MDR-TB | lineage4.3.4.2 | None |
ERR11488815 | MDR-TB | lineage4.1.2 | None |
SRR29231794 | MDR-TB | lineage4.3.3 | None |
ERR4797937 | Pre-XDR-TB | lineage3 | in |
SRR29231317 | MDR-TB | lineage4.3.3 | None |
SRR29274197 | MDR-TB | lineage4.4.1.1 | None |
ERR10680112 | MDR-TB | lineage4.1.3 | None |
ERR688037 | Pre-XDR-TB | lineage3 | None |
SRR11342643 | MDR-TB | lineage4.1.1.1 | None |
ERR552653_ERR552652 | MDR-TB | lineage2.2.1 | None |
SRR29914418 | MDR-TB | lineage4.2.2 | None |
SRR18002875 | MDR-TB | lineage2.2.2 | None |
ERR13284021 | MDR-TB | lineage2.2.1 | None |
ERR552653 | MDR-TB | lineage2.2.1 | None |
SRR29273692 | MDR-TB | lineage4.4.1.1 | None |
SRR24222952 | MDR-TB | lineage2.2.1 | None |
ERR2510415 | MDR-TB | lineage3 | pk |
ERR2510292 | Pre-XDR-TB | lineage3 | pk |
SRR25206950 | Pre-XDR-TB | lineage2.2.1 | None |
ERR7910853 | MDR-TB | lineage4.3.4.1 | pe |
ERR7910874 | MDR-TB | lineage4.3.3 | pe |
SRR7341655 | MDR-TB | lineage4.4.1.1 | ro |
ERR2707030 | MDR-TB | lineage4.3.3 | cd |
ERR2707146 | MDR-TB | lineage4.3.3 | cd |
ERR2706972 | MDR-TB | lineage4.3.3 | cd |
ERR10748289 | MDR-TB | lineage2.2.1.1 | None |
ERR4810962 | MDR-TB | lineage2.2.1 | cn |
ERR552652 | MDR-TB | lineage2.2.1 | None |
ERR2510475 | RR-TB | lineage3 | pk |
ERR3132095 | MDR-TB | lineage3 | None |
ERR688048 | Pre-XDR-TB | lineage3 | None |
ERR5987458 | MDR-TB | lineage4.3.4.2 | None |
ERR688019 | Pre-XDR-TB | lineage3 | None |
ERR4813647 | Pre-XDR-TB | lineage4.3.3 | None |
ERR4797844 | Pre-XDR-TB | lineage3.1.2 | in |
ERR2516878 | MDR-TB | lineage3 | gb |
SRR1183082 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6824666 | MDR-TB | lineage2.2.1 | cn |
ERR2516874 | MDR-TB | lineage3 | gb |
ERR5866453 | MDR-TB | lineage4.3.3 | None |
SRR1180173 | Pre-XDR-TB | lineage2.2.1 | None |
SRR15316185 | MDR-TB | lineage4.4.2 | None |
SRR10315688 | RR-TB | lineage4.3.2.1 | None |
ERR1034605 | Pre-XDR-TB | lineage3 | pk |
ERR688047 | Pre-XDR-TB | lineage3 | None |
SRR29539767 | MDR-TB | lineage2.2.1 | None |
SRR29356788 | MDR-TB | lineage2.2.1 | None |
SRR6824484 | XDR-TB | lineage4.4.2 | cn |
SRR25206945 | MDR-TB | lineage2.2.1 | None |
SRR29231728 | MDR-TB | lineage4.3.3 | None |