lineage | Count |
---|---|
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
37 | |
lineage4 | 41 |
lineage4.9 | 6 |
lineage4.1.1.2 | 1 |
lineage4.8 | 2 |
lineage4.9;lineage2.1 | 1 |
lineage2.2.1 | 7 |
lineage4.6.2.2 | 2 |
lineage4.3.4.1 | 2 |
lineage4.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1.2.1 | 3 |
lineage4.1.2 | 2 |
lineage4.3.2.1 | 1 |
lineage4.4.1.1;lineage1.2.2.1 | 1 |
lineage4.3.4.1;La1.7 | 1 |
lineage4;lineage3.1 | 1 |
lineage2.2 | 2 |
lineage1.1.3.1 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage6.1.3 | 1 |
La1.8.1 | 1 |
spoligotype | Count |
---|---|
None | 119 |
ID | Drug resistance | Lineage | Country iso2 | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675510 | Other | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675270 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341453 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341303 | RR-TB | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341330 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6045555 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6046878 | HR-TB | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | ERR4830353 | Other | None | SRR6046492 | Other | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323107 | Other | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323085 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063857 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR323115 | Sensitive | lineage4 | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR4769452 | HR-TB | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797474 | Other | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4796254 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | SRR10808805 | Sensitive | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1183049 | Other | lineage2.2 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR26399239 | Sensitive | lineage4.9 | None |
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