Rv0668 - c.-180C>T


Drug resistance types
33 Sensitive 3 RR-TB 31 HR-TB 16 MDR-TB 7 Pre-XDR-TB 1 XDR-TB 158 Other
lineage Counts
lineage Count
La1;lineage4.9 1
lineage4.9 70
lineage4.9;lineage6.3 7
La3;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 9
lineage4.8 6
La3 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 5
lineage2.1;lineage4.9 14
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.2.1 16
lineage4.4.1.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage3.1 1
lineage4.6.2.2 2
lineage4.8;lineage4.9 3
lineage4.1.2.1 11
21
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7;M.canetti;lineage4.9 2
La1.7;lineage4.9 5
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 2
lineage1.1.2 2
lineage2.1;lineage6.3 2
lineage4.1.2 2
lineage1.1;lineage4 1
lineage2.2 2
lineage4.3.4.2.1 2
lineage4 2
lineage2.2.1;lineage6.3 1
lineage3.1.1 1
lineage4.1.3 2
La1;lineage4.1.2 1
La3;lineage2.2.1 2
lineage2.2.1.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.7 2
lineage3 3
lineage6.1.3 2
La3;lineage2 1
lineage6.3.1 1
La3;lineage2.1;lineage4.9 2
La3;lineage1.1.2 1
La3;lineage3 1
lineage4.1.1.2 1
lineage2.2.2;lineage4 1
lineage4.1.1.1 3
lineage4.3.2 1
lineage4.3.4.1 1
lineage4.3.3 3
M.canetti;lineage2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.8.1 1
La1.7 1
lineage4.3.2.1 2
La3;lineage2.2.2 1
lineage2.2.1;lineage3 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 249
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10808805 Other La1;lineage4.9 None
SRR29093909 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341303 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4799378 Sensitive lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
SRR3675549 Other lineage4.9 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR323085 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR1184294 Other lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
SRR3675572 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR29096541 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR6785267 Other lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR473323 HR-TB lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6358979 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4819322 Other lineage1.1;lineage4 None
ERR4816585 Other lineage2.2 None
ERR323107 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816999 Other None
SRR26159043 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR28119753 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6785263 Sensitive lineage2.2.1 None
ERR11466174 Other lineage4.8 None
SRR3675236 Other None
ERR3273109 HR-TB lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR1035122 Sensitive lineage4.9 None
SRR1175049 Other lineage4.8;lineage4.9 None
ERR9117709 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR7496509 Other None
ERR12015083 Other La3;lineage4.8 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR736834 Sensitive lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR9971112 Other lineage2.2.1 None
SRR5341299 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
ERR4817060 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
SRR7070041 Sensitive lineage4.7 None
ERR9786076 Sensitive lineage3 None
ERR4819781 Other lineage2.2.1 None
SRR1184372 MDR-TB None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR4818347 Other lineage4.1.2 None
ERR4818615 Sensitive None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR323066 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR9787139 Other lineage6.3.1 None
SRR1710057 Other lineage2.1 None
ERR502511 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1196677 Other lineage2.2 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR1023302 MDR-TB La3;lineage3 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR4815604 Other None
ERR736856 Sensitive lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR1196546 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR29051093 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR751326 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR11081258 Other lineage4.8 None
ERR4800341 Other lineage3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR5341453 Other lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR12416842 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR11466499 Other lineage4.3.4.1 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1172234 Other lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR28119752 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR3675311 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR29097037 Other lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR6789621 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR137286 Other lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR1173355 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
SRR7496517 Other None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR1791747 Other La1.8.1 None
SRR3675492 Other La1.7;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702405 Sensitive lineage4.9 None
SRR1196494 MDR-TB None
ERR4830353 Other La1.7 None
ERR323115 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
ERR9787256 Other lineage6.1.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR10809074 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
ERR4797184 Sensitive lineage4.9 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None