Rv1979c - c.432delT
Drug resistance types
204 Sensitive
2 RR-TB
16 HR-TB
11 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.3 | 282 |
| lineage4.8.2;lineage3.1.3 | 2 |
| lineage4.3.3 | 1 |
| lineage4.2.1;lineage3.1.3 | 1 |
| lineage3.1.3;lineage2.2.1 | 1 |
| lineage4;lineage3.1.3 | 3 |
| 2 | |
| lineage3 | 2 |
| lineage4.6.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 295 |
Geographic prevalence
Country level data for this variant is available for 112 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR072055 | Other | lineage3.1.3 | None | ERR072043 | Sensitive | lineage3.1.3 | None | ERR072054 | Sensitive | lineage3.1.3 | None | ERR072101 | Sensitive | lineage3.1.3 | None | ERR072066 | Other | lineage3.1.3 | None | ERR1035160 | Sensitive | lineage3.1.3 | sa | ERR1035164 | Sensitive | lineage3.1.3 | None | ERR11043932 | Sensitive | lineage3.1.3 | None | ERR11043118 | Sensitive | lineage3.1.3 | None | ERR11043220 | Sensitive | lineage3.1.3 | None | ERR11043245 | Sensitive | lineage3.1.3 | None | ERR1035170 | Sensitive | lineage3.1.3 | sa | ERR10465903 | HR-TB | lineage3.1.3 | None | ERR11043391 | Sensitive | lineage3.1.3 | None | ERR11043821 | MDR-TB | lineage3.1.3 | None | ERR11043956 | Sensitive | lineage3.1.3 | None | ERR11044118 | Sensitive | lineage3.1.3 | None | ERR11043965 | Sensitive | lineage3.1.3 | None | ERR11044591 | Sensitive | lineage3.1.3 | None | ERR11044206 | Sensitive | lineage3.1.3 | None | ERR11044642 | MDR-TB | lineage3.1.3 | None | ERR11044704 | Sensitive | lineage3.1.3 | None | ERR11044860 | Sensitive | lineage3.1.3 | None | ERR11044944 | Sensitive | lineage3.1.3 | None | ERR117643 | Sensitive | lineage3.1.3 | None | ERR114503 | HR-TB | lineage3.1.3 | None | ERR114465 | Other | lineage4.8.2;lineage3.1.3 | None | ERR117717 | MDR-TB | lineage3.1.3 | None | ERR117712 | Sensitive | lineage3.1.3 | None | ERR117713 | Sensitive | lineage3.1.3 | None | ERR330718 | Sensitive | lineage3.1.3 | None | ERR123936 | Sensitive | lineage3.1.3 | None | ERR3335735 | Pre-XDR-TB | lineage3.1.3 | pk | ERR330736 | Other | lineage3.1.3 | None | ERR330726 | Other | lineage3.1.3 | None | ERR3335748 | Pre-XDR-TB | lineage3.1.3 | pk | ERR3335761 | Pre-XDR-TB | lineage3.1.3 | pk | ERR386960 | Other | lineage3.1.3 | None | ERR3335774 | Pre-XDR-TB | lineage3.1.3 | pk | ERR386903 | Sensitive | lineage3.1.3 | None | ERR3335755 | Pre-XDR-TB | lineage3.1.3 | pk | ERR4797416 | Sensitive | lineage3.1.3 | in | ERR387019 | Other | lineage3.1.3 | None | ERR400314 | Sensitive | lineage3.1.3 | gb | ERR400337 | Sensitive | lineage3.1.3 | gb | ERR403341 | Other | lineage3.1.3 | None | ERR403405 | Other | lineage3.1.3 | None | ERR4797161 | Sensitive | lineage3.1.3 | in | ERR4797330 | Sensitive | lineage3.1.3 | in | ERR4796489 | Sensitive | lineage3.1.3 | in | ERR4797248 | Sensitive | lineage3.1.3 | in | ERR4797706 | Sensitive | lineage3.1.3 | in | ERR4797644 | HR-TB | lineage3.1.3 | in | ERR4799115 | Sensitive | lineage3.1.3 | in | ERR4798449 | Sensitive | lineage3.1.3 | in | ERR4799253 | Sensitive | lineage3.1.3 | in | ERR9117754 | Sensitive | lineage3.1.3 | None | ERR4800387 | MDR-TB | lineage3.1.3 | None | ERR5979439 | Sensitive | lineage3.1.3 | None | ERR4799813 | Sensitive | lineage3.1.3 | in | ERR9117743 | Sensitive | lineage3.1.3 | None | ERR9117775 | HR-TB | lineage3.1.3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR9125814 | Sensitive | lineage3.1.3 | None | ERR9117824 | Sensitive | lineage3.1.3 | None | ERR9125309 | HR-TB | lineage3.1.3 | None | ERR9125822 | Sensitive | lineage3.1.3 | None | ERR9125798 | Sensitive | lineage3.1.3 | None | SRR11033636 | Sensitive | lineage3.1.3 | None | ERR9992951 | Pre-XDR-TB | lineage4.3.3 | None | SRR10397105 | HR-TB | lineage4.2.1;lineage3.1.3 | None | ERR11050322 | Sensitive | lineage3.1.3 | None | SRR1172895 | Pre-XDR-TB | lineage3.1.3;lineage2.2.1 | None | ERR11050410 | Sensitive | lineage3.1.3 | None | SRR12882710 | HR-TB | lineage3.1.3 | None | SRR12882120 | HR-TB | lineage3.1.3 | None | SRR12882701 | Sensitive | lineage3.1.3 | None | SRR16058099 | Sensitive | lineage3.1.3 | None | SRR14088388 | HR-TB | lineage3.1.3 | None | SRR15722976 | Sensitive | lineage3.1.3 | None | SRR16057947 | Sensitive | lineage3.1.3 | None | SRR16058116 | Sensitive | lineage3.1.3 | None | SRR18213681 | Sensitive | lineage3.1.3 | None | SRR16058287 | HR-TB | lineage3.1.3 | None | SRR18213655 | Sensitive | lineage3.1.3 | None | SRR18213837 | Sensitive | lineage3.1.3 | None | SRR18213748 | Sensitive | lineage3.1.3 | None | SRR18213861 | Sensitive | lineage3.1.3 | None | SRR18213894 | Other | lineage3.1.3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18213885 | Sensitive | lineage3.1.3 | None | SRR18213888 | Sensitive | lineage3.1.3 | None | SRR18213896 | Sensitive | lineage3.1.3 | None | SRR2100025 | Sensitive | lineage3.1.3 | None | SRR2100110 | Other | lineage3.1.3 | None | SRR2100350 | HR-TB | lineage3.1.3 | None | SRR2100118 | Other | lineage3.1.3 | None | SRR2100141 | Sensitive | lineage3.1.3 | None | SRR2100173 | Sensitive | lineage3.1.3 | None | SRR2100211 | Sensitive | lineage3.1.3 | None | SRR2100106 | Sensitive | lineage3.1.3 | None | SRR2100368 | MDR-TB | lineage3.1.3 | None | SRR2100364 | Sensitive | lineage3.1.3 | None | SRR2100365 | Sensitive | lineage3.1.3 | None | SRR2100682 | Sensitive | lineage3.1.3 | None | SRR2100517 | Sensitive | lineage3.1.3 | None | SRR2100519 | Sensitive | lineage3.1.3 | None | SRR2100633 | Sensitive | lineage3.1.3 | None | SRR2100658 | Sensitive | lineage3.1.3 | None | SRR2100674 | Sensitive | lineage3.1.3 | None | SRR2100503 | Sensitive | lineage3.1.3 | None | SRR2100616 | Sensitive | lineage3.1.3 | None | SRR2100646 | Sensitive | lineage3.1.3 | None | SRR2100754 | Other | lineage3.1.3 | None | SRR2100807 | Other | lineage3.1.3 | None | SRR2100972 | Other | lineage3.1.3 | None | SRR2100931 | Sensitive | lineage3.1.3 | None | SRR2101019 | Sensitive | lineage3.1.3 | None | SRR2101156 | Sensitive | lineage3.1.3 | None | SRR2101025 | Sensitive | lineage3.1.3 | None | SRR2101034 | Other | lineage3.1.3 | None | SRR2101164 | Other | lineage3.1.3 | None | SRR2101174 | Other | lineage3.1.3 | None | SRR21686114 | Other | lineage3.1.3 | None | SRR21676511 | Other | lineage3.1.3 | None | SRR21658558 | Sensitive | lineage3.1.3 | None | SRR21663285 | Sensitive | lineage3.1.3 | None | SRR21714054 | Sensitive | lineage3.1.3 | None | SRR21710937 | Sensitive | lineage3.1.3 | None | ERR11067684 | Sensitive | lineage3.1.3 | None | SRR21727577 | Sensitive | lineage3.1.3 | None | ERR11067700 | Sensitive | lineage4;lineage3.1.3 | None | SRR3055239 | Sensitive | lineage3.1.3 | None | ERR11068168 | Sensitive | lineage3.1.3 | None | ERR11068531 | Sensitive | lineage3.1.3 | None | ERR11082854 | Sensitive | lineage3.1.3 | None | ERR11083128 | Sensitive | lineage3.1.3 | None | ERR4814295 | Sensitive | lineage3.1.3 | None | ERR4815288 | Sensitive | lineage3.1.3 | gb | ERR4815205 | Sensitive | lineage3.1.3 | gb | ERR4814839 | Sensitive | lineage3.1.3 | gb | ERR4814545 | Other | lineage3.1.3 | None | SAMEA2533545 | RR-TB | lineage3.1.3 | uz | ERR4814724 | Other | lineage3.1.3 | None | ERR4815577 | Other | lineage3.1.3 | None | ERR4815001 | Sensitive | lineage3.1.3 | None | SRR1723409 | Sensitive | lineage3.1.3 | cn | ERR4817131 | Pre-XDR-TB | None | ERR2027220 | Other | lineage3.1.3 | None | ERR551013 | Sensitive | lineage3.1.3 | de | ERR2027291 | Sensitive | lineage3.1.3 | None | ERR4817518 | Sensitive | lineage3.1.3 | None | ERR2145502 | Sensitive | lineage3.1.3 | None | ERR4816096 | Sensitive | lineage3.1.3 | None | ERR552820 | Sensitive | lineage3.1.3 | de | SRR3675532 | HR-TB | lineage3.1.3 | None | ERR2145503 | HR-TB | lineage3.1.3 | None | ERR4817155 | Other | lineage3.1.3 | gb | ERR4816616 | Sensitive | lineage3.1.3 | None | ERR2446165 | Sensitive | lineage3.1.3 | nl | ERR552567 | Sensitive | lineage3.1.3 | de | ERR4817755 | Sensitive | lineage3.1.3 | None | ERR4816759 | Sensitive | lineage3.1.3 | gb | ERR4816780 | Sensitive | lineage3.1.3 | gb | ERR4817444 | Sensitive | lineage3.1.3 | gb | ERR3275216 | Sensitive | lineage3.1.3 | nl | ERR228142 | Sensitive | lineage3.1.3 | None | ERR2510620 | MDR-TB | lineage3.1.3 | pk | ERR228158 | Sensitive | lineage3.1.3 | None | ERR4817868 | Sensitive | lineage3.1.3 | gb | ERR228161 | Sensitive | lineage3.1.3 | None | ERR4818727 | Sensitive | lineage3.1.3 | None | ERR2513389 | Other | lineage3.1.3 | gb | ERR228262 | Sensitive | lineage3.1.3 | None | ERR2513035 | Sensitive | lineage3.1.3 | gb | ERR228280 | Sensitive | lineage3.1.3 | None | ERR228212 | Sensitive | lineage3.1.3 | None | ERR2200081 | Sensitive | lineage3.1.3 | de | ERR2512536 | Other | lineage3.1.3 | None | ERR230057 | Sensitive | lineage3.1.3 | None | ERR234168 | Sensitive | lineage3.1.3 | de | ERR2512470 | Sensitive | lineage3.1.3 | gb | ERR11067169 | Sensitive | lineage3.1.3 | None | ERR230018 | Sensitive | lineage3.1.3 | None | ERR230031 | Sensitive | lineage3.1.3 | None | ERR230049 | Sensitive | lineage3.1.3 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818057 | Sensitive | lineage3.1.3 | None | ERR2512416 | Sensitive | lineage3.1.3 | gb | ERR2513462 | Sensitive | lineage3.1.3 | gb | ERR551936 | Sensitive | lineage3.1.3 | de | ERR2200121 | Sensitive | lineage3.1.3 | de | ERR2513589 | Other | lineage3.1.3 | None | ERR4818319 | Sensitive | lineage3.1.3 | gb | ERR2513716 | Sensitive | lineage3.1.3 | gb | ERR2513248 | Sensitive | lineage3.1.3 | gb | ERR2512766 | Other | lineage3.1.3 | None | ERR2510249 | Pre-XDR-TB | lineage3.1.3 | pk | ERR2512828 | Other | lineage3.1.3 | gb | ERR4818602 | Sensitive | lineage3.1.3 | gb | ERR11067160 | Other | lineage3.1.3 | None | ERR2510388 | MDR-TB | lineage3.1.3 | pk | ERR2512934 | Sensitive | lineage3.1.3 | gb | ERR2513357 | Sensitive | lineage3.1.3 | gb | ERR4818453 | Sensitive | lineage3.1.3 | gb | ERR2510344 | Sensitive | lineage3.1.3 | pk | ERR4819182 | Sensitive | lineage3.1.3 | gb | ERR2513855 | Other | lineage3.1.3 | gb | ERR4819278 | Sensitive | lineage3.1.3 | gb | ERR2513889 | Other | lineage3.1.3 | gb | SRR1723410 | Sensitive | lineage3.1.3 | cn | ERR2513941 | Sensitive | lineage3.1.3 | None | ERR2513896 | Sensitive | lineage3.1.3 | gb | ERR2513921 | Sensitive | lineage3.1.3 | gb | ERR2513973 | Sensitive | lineage3.1.3 | gb | ERR2514070 | Other | lineage3 | None | ERR2514286 | Other | lineage3.1.3 | gb | ERR2514269 | Other | lineage3.1.3 | gb | ERR2514230 | Sensitive | lineage3.1.3 | gb | ERR4819516 | Sensitive | lineage3.1.3 | gb | ERR2446113 | Sensitive | lineage4;lineage3.1.3 | nl | ERR2514363 | Other | lineage3.1.3 | gb | ERR2514296 | Other | lineage3.1.3 | gb | ERR3276289 | Sensitive | lineage3.1.3 | nl | ERR2516601 | MDR-TB | lineage3.1.3 | nl | SRR5341435 | Sensitive | lineage3.1.3 | in | ERR4820480 | Sensitive | lineage3.1.3 | None | ERR2446249 | Sensitive | lineage3.1.3 | nl | ERR4820478 | Other | lineage3.1.3 | None | ERR2517055 | MDR-TB | lineage3.1.3 | gb | ERR2514593 | Sensitive | lineage3.1.3 | gb | ERR2514599 | Sensitive | lineage3.1.3 | gb | ERR2514572 | Other | lineage3.1.3 | gb | ERR4820823 | Sensitive | lineage3.1.3 | None | ERR2514776 | Other | lineage4.8.2;lineage3.1.3 | gb | ERR4819926 | Sensitive | lineage3.1.3 | gb | ERR2517223 | Sensitive | lineage3.1.3 | nl | ERR4820068 | Sensitive | lineage3.1.3 | gb | ERR2179617 | Sensitive | lineage3.1.3 | cn | ERR2514921 | Other | lineage3.1.3 | gb | ERR2516790 | MDR-TB | lineage3.1.3 | gb | ERR257888 | Sensitive | lineage3 | None | ERR2517132 | Sensitive | lineage3.1.3 | nl | SAMEA2533902 | RR-TB | lineage3.1.3 | uz | ERR3275323 | Sensitive | lineage3.1.3 | nl | ERR257889 | Sensitive | lineage3.1.3 | None | ERR2515102 | Other | lineage3.1.3 | gb | ERR2517493 | Sensitive | lineage4;lineage3.1.3 | nl | ERR257890 | Sensitive | lineage3.1.3 | None | ERR266535 | Other | lineage3.1.3 | None | ERR2704693 | Sensitive | lineage3.1.3 | de | ERR4821706 | Sensitive | lineage3.1.3 | None | ERR278544 | Sensitive | lineage3.1.3 | None | ERR266599 | Other | lineage3.1.3 | None | ERR2179615 | Sensitive | lineage3.1.3 | cn | ERR4827618 | Sensitive | lineage3.1.3 | None | ERR4827733 | Sensitive | lineage3.1.3 | None | ERR2179842 | Sensitive | lineage3.1.3 | cn | ERR4822005 | Sensitive | lineage3.1.3 | gb | SRR6045741 | Sensitive | lineage3.1.3 | gb | ERR4827839 | HR-TB | lineage3.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045696 | Sensitive | lineage3.1.3 | None | SRR6045713 | Sensitive | lineage3.1.3 | gb | SRR6044956 | Sensitive | lineage3.1.3 | gb | SRR6045779 | Sensitive | lineage3.1.3 | gb | SRR6045844 | Other | lineage3.1.3 | None | SRR6045947 | Sensitive | lineage3.1.3 | gb | ERR023741 | HR-TB | None | SRR6045966 | Other | lineage3.1.3 | gb | ERR278601 | Other | lineage3.1.3 | None | SRR6046400 | Sensitive | lineage3.1.3 | None | ERR11049776 | Sensitive | lineage3.1.3 | None | ERR4828794 | Sensitive | lineage3.1.3 | None | ERR4830747 | MDR-TB | lineage3.1.3 | ir | ERR4829803 | HR-TB | lineage3.1.3 | it | SRR6046753 | Sensitive | lineage3.1.3 | gb | SRR6152778 | Sensitive | lineage3.1.3 | ca | SRR6153073 | Sensitive | lineage3.1.3 | ca | ERR294228 | Sensitive | lineage3.1.3 | None | ERR023742 | Sensitive | lineage3.1.3 | None | SRR6045065 | Sensitive | lineage3.1.3 | gb | SRR6045997 | Other | lineage3.1.3 | gb | ERR4830109 | Sensitive | lineage3.1.3 | None | ERR4829518 | Sensitive | lineage3.1.3 | it | SRR6153207 | Sensitive | lineage3.1.3 | ca | ERR294217 | Sensitive | lineage3.1.3 | None | ERR294238 | Other | lineage3.1.3 | None | ERR550710 | Sensitive | lineage3.1.3 | de | SRR6797771 | Sensitive | lineage3.1.3 | None | ERR11067570 | Sensitive | lineage3.1.3 | None | ERR023745 | Sensitive | lineage3.1.3 | nl | ERR028330 | Sensitive | lineage4.6.1 | None | ERR028341 | Sensitive | lineage3.1.3 | None |
|---|
