Rv0006 - c.585T>C
Drug resistance types
33 Sensitive
2 RR-TB
118 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 1 |
| 127 | |
| lineage4.9 | 27 |
| lineage4.3.4 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.2.1 | 13 |
| lineage1.2.1.1 | 1 |
| lineage4 | 17 |
| lineage4.3 | 1 |
| lineage4.8 | 2 |
| lineage4.1 | 2 |
| lineage2.2 | 4 |
| lineage3.1.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.1.1 | 2 |
| La1.2 | 1 |
| lineage2 | 2 |
| La1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 220 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675502 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR158583 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR158570 | MDR-TB | lineage2.2.1 | ru | SRR3675488 | HR-TB | None | SRR3675221 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675222 | Other | None | SRR3675236 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR181824 | HR-TB | lineage4 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR181887 | HR-TB | None | ERR212034 | HR-TB | None | ERR176751 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR3675555 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675572 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR212123 | Other | None | SRR3742665 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR229957 | HR-TB | lineage2.2.1 | ru | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR1035162 | Other | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | SRR5341418 | Other | None | ERR4818615 | Other | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR1035138 | MDR-TB | None | SRR5341330 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2693254 | Other | None | SRR6045450 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | ERR2693230 | Other | None | SRR6045519 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6046133 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046046 | Other | None | SRR6045233 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045399 | Other | None | SRR6045327 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046225 | HR-TB | None | ERR4830353 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789626 | Other | None | SRR7535086 | Other | None | ERR502889 | Other | None | SRR6981961 | Sensitive | lineage2.2.1 | None | ERR502532 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323043 | HR-TB | None | ERR323045 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1034652 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR108471 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR133986 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283027 | HR-TB | None | ERR5336148 | Other | None | ERR3445503 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3797036 | HR-TB | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797044 | Other | None | ERR4769452 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR702404 | HR-TB | None | ERR736874 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736867 | HR-TB | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736875 | HR-TB | lineage4 | None | SRR1173384 | Other | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173363 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9786843 | Other | None | SRR1169249 | Other | La3 | None | SRR1172728 | MDR-TB | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173400 | Other | None | SRR1173778 | Other | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175049 | RR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1196546 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None |
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