SRR10397105
|
HR-TB
|
lineage4.2.1;lineage3.1.3
|
None
|
SRR10525361
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1172895
|
Pre-XDR-TB
|
lineage3.1.3;lineage2.2.1
|
None
|
SRR10525320
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR11033636
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11050322
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11050410
|
Sensitive
|
lineage3.1.3
|
None
|
SRR12882120
|
HR-TB
|
lineage3.1.3
|
None
|
SRR12882710
|
HR-TB
|
lineage3.1.3
|
None
|
SRR14088388
|
HR-TB
|
lineage3.1.3
|
None
|
SRR12882701
|
Sensitive
|
lineage3.1.3
|
None
|
SRR16057947
|
Sensitive
|
lineage3.1.3
|
None
|
SRR15722976
|
Sensitive
|
lineage3.1.3
|
None
|
SRR16058116
|
Sensitive
|
lineage3.1.3
|
None
|
SRR18213748
|
Sensitive
|
lineage3.1.3
|
None
|
SRR16058287
|
HR-TB
|
lineage3.1.3
|
None
|
SRR18213655
|
Sensitive
|
lineage3.1.3
|
None
|
SRR16058099
|
Sensitive
|
lineage3.1.3
|
None
|
SRR18213681
|
Sensitive
|
lineage3.1.3
|
None
|
SRR18213861
|
Sensitive
|
lineage3.1.3
|
None
|
SRR18213837
|
Sensitive
|
lineage3.1.3
|
None
|
SRR18213885
|
Sensitive
|
lineage3.1.3
|
None
|
SRR18213888
|
Sensitive
|
lineage3.1.3
|
None
|
SRR18213894
|
Other
|
lineage3.1.3
|
None
|
SRR2100025
|
Sensitive
|
lineage3.1.3
|
None
|
SRR18213896
|
Sensitive
|
lineage3.1.3
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100106
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100211
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100110
|
Other
|
lineage3.1.3
|
None
|
SRR2100141
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100118
|
Other
|
lineage3.1.3
|
None
|
SRR2100173
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100365
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100314
|
Other
|
lineage3.1.3;lineage3.1.1
|
None
|
SRR2100350
|
HR-TB
|
lineage3.1.3
|
None
|
SRR2100517
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100503
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100368
|
MDR-TB
|
lineage3.1.3
|
None
|
SRR2100364
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100519
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100658
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100633
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100616
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100646
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100674
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100754
|
Other
|
lineage3.1.3
|
None
|
SRR2100682
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100931
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100807
|
Other
|
lineage3.1.3
|
None
|
SRR2101019
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2100972
|
Other
|
lineage3.1.3
|
None
|
SRR21663285
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2101034
|
Other
|
lineage3.1.3
|
None
|
SRR2101156
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2101164
|
Other
|
lineage3.1.3
|
None
|
SRR21658558
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2101025
|
Sensitive
|
lineage3.1.3
|
None
|
SRR2101174
|
Other
|
lineage3.1.3
|
None
|
SRR21714054
|
Sensitive
|
lineage3.1.3
|
None
|
SRR21710937
|
Sensitive
|
lineage3.1.3
|
None
|
SRR21676511
|
Other
|
lineage3.1.3
|
None
|
SRR21686114
|
Other
|
lineage3.1.3
|
None
|
ERR11068168
|
Sensitive
|
lineage3.1.3
|
None
|
SRR21727577
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11067684
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11067700
|
Sensitive
|
lineage4;lineage3.1.3
|
None
|
SRR3055239
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11083128
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11068531
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11082854
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4815205
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4814545
|
Other
|
lineage3.1.3
|
None
|
ERR4815288
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4814295
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4815001
|
Sensitive
|
lineage3.1.3
|
None
|
SAMEA2533545
|
RR-TB
|
lineage3.1.3
|
uz
|
ERR4814724
|
Other
|
lineage3.1.3
|
None
|
ERR4814839
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4816096
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4815577
|
Other
|
lineage3.1.3
|
None
|
ERR2027220
|
Other
|
lineage3.1.3
|
None
|
SRR1723409
|
Sensitive
|
lineage3.1.3
|
cn
|
ERR552820
|
Sensitive
|
lineage3.1.3
|
de
|
ERR551013
|
Sensitive
|
lineage3.1.3
|
de
|
ERR2027291
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4817518
|
Sensitive
|
lineage3.1.3
|
None
|
SRR3675532
|
HR-TB
|
lineage3.1.3
|
None
|
ERR4817106
|
HR-TB
|
lineage4.1.2.1
|
gb
|
ERR2446165
|
Sensitive
|
lineage3.1.3
|
nl
|
ERR2145502
|
Sensitive
|
lineage3.1.3
|
None
|
ERR2145503
|
HR-TB
|
lineage3.1.3
|
None
|
ERR4817131
|
Pre-XDR-TB
|
|
None
|
ERR4817155
|
Other
|
lineage3.1.3
|
gb
|
ERR4816616
|
Sensitive
|
lineage3.1.3
|
None
|
ERR552567
|
Sensitive
|
lineage3.1.3
|
de
|
ERR4816759
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4816780
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR3275216
|
Sensitive
|
lineage3.1.3
|
nl
|
ERR4817444
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2510620
|
MDR-TB
|
lineage3.1.3
|
pk
|
ERR4817755
|
Sensitive
|
lineage3.1.3
|
None
|
ERR228158
|
Sensitive
|
lineage3.1.3
|
None
|
ERR228142
|
Sensitive
|
lineage3.1.3
|
None
|
ERR228161
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4817868
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2513389
|
Other
|
lineage3.1.3
|
gb
|
ERR228212
|
Sensitive
|
lineage3.1.3
|
None
|
ERR228262
|
Sensitive
|
lineage3.1.3
|
None
|
ERR230018
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4818727
|
Sensitive
|
lineage3.1.3
|
None
|
ERR2513035
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR228280
|
Sensitive
|
lineage3.1.3
|
None
|
ERR2200081
|
Sensitive
|
lineage3.1.3
|
de
|
ERR230031
|
Sensitive
|
lineage3.1.3
|
None
|
ERR230049
|
Sensitive
|
lineage3.1.3
|
None
|
ERR230057
|
Sensitive
|
lineage3.1.3
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
ERR234168
|
Sensitive
|
lineage3.1.3
|
de
|
ERR11067169
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4818057
|
Sensitive
|
lineage3.1.3
|
None
|
ERR2512416
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2512470
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2513462
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR551936
|
Sensitive
|
lineage3.1.3
|
de
|
ERR2512536
|
Other
|
lineage3.1.3
|
None
|
ERR2513589
|
Other
|
lineage3.1.3
|
None
|
ERR2200121
|
Sensitive
|
lineage3.1.3
|
de
|
ERR4818319
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2510249
|
Pre-XDR-TB
|
lineage3.1.3
|
pk
|
ERR2513248
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4818453
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2512766
|
Other
|
lineage3.1.3
|
None
|
ERR2513855
|
Other
|
lineage3.1.3
|
gb
|
ERR2510344
|
Sensitive
|
lineage3.1.3
|
pk
|
ERR2510388
|
MDR-TB
|
lineage3.1.3
|
pk
|
ERR4819182
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2512828
|
Other
|
lineage3.1.3
|
gb
|
ERR4818602
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR11067160
|
Other
|
lineage3.1.3
|
None
|
ERR2512934
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2513357
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2513716
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4819278
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2516601
|
MDR-TB
|
lineage3.1.3
|
nl
|
ERR2513889
|
Other
|
lineage3.1.3
|
gb
|
ERR2513921
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2513941
|
Sensitive
|
lineage3.1.3
|
None
|
ERR2514269
|
Other
|
lineage3.1.3
|
gb
|
ERR2514296
|
Other
|
lineage3.1.3
|
gb
|
ERR2513896
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2513973
|
Sensitive
|
lineage3.1.3
|
gb
|
SRR1723410
|
Sensitive
|
lineage3.1.3
|
cn
|
ERR2514070
|
Other
|
lineage3
|
None
|
ERR2514230
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4819516
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2514286
|
Other
|
lineage3.1.3
|
gb
|
ERR3276289
|
Sensitive
|
lineage3.1.3
|
nl
|
ERR2514363
|
Other
|
lineage3.1.3
|
gb
|
ERR2517007
|
MDR-TB
|
lineage4.1.2.1
|
gb
|
ERR2446113
|
Sensitive
|
lineage4;lineage3.1.3
|
nl
|
ERR2514593
|
Sensitive
|
lineage3.1.3
|
gb
|
SRR5341435
|
Sensitive
|
lineage3.1.3
|
in
|
ERR4820478
|
Other
|
lineage3.1.3
|
None
|
ERR2446249
|
Sensitive
|
lineage3.1.3
|
nl
|
ERR4820480
|
Sensitive
|
lineage3.1.3
|
None
|
ERR2514572
|
Other
|
lineage3.1.3
|
gb
|
ERR2517223
|
Sensitive
|
lineage3.1.3
|
nl
|
ERR2514599
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2517055
|
MDR-TB
|
lineage3.1.3
|
gb
|
ERR2514921
|
Other
|
lineage3.1.3
|
gb
|
ERR2514776
|
Other
|
lineage4.8.2;lineage3.1.3
|
gb
|
ERR4820823
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4819926
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR2515102
|
Other
|
lineage3.1.3
|
gb
|
ERR2179617
|
Sensitive
|
lineage3.1.3
|
cn
|
ERR2516790
|
MDR-TB
|
lineage3.1.3
|
gb
|
ERR3275333
|
Sensitive
|
lineage4;lineage3.1.3
|
nl
|
ERR4820068
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR3275323
|
Sensitive
|
lineage3.1.3
|
nl
|
ERR2516859
|
MDR-TB
|
lineage4.1.2.1
|
gb
|
ERR2517132
|
Sensitive
|
lineage3.1.3
|
nl
|
SAMEA2533902
|
RR-TB
|
lineage3.1.3
|
uz
|
ERR257890
|
Sensitive
|
lineage3.1.3
|
None
|
ERR2517493
|
Sensitive
|
lineage4;lineage3.1.3
|
nl
|
ERR257889
|
Sensitive
|
lineage3.1.3
|
None
|
ERR257888
|
Sensitive
|
lineage3
|
None
|
ERR2179615
|
Sensitive
|
lineage3.1.3
|
cn
|
ERR278544
|
Sensitive
|
lineage3.1.3
|
None
|
ERR266599
|
Other
|
lineage3.1.3
|
None
|
ERR2704693
|
Sensitive
|
lineage3.1.3
|
de
|
ERR266535
|
Other
|
lineage3.1.3
|
None
|
ERR2179842
|
Sensitive
|
lineage3.1.3
|
cn
|
ERR4822005
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4827618
|
Sensitive
|
lineage3.1.3
|
None
|
SRR6045696
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4827733
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4821706
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4827839
|
HR-TB
|
lineage3.1.3
|
None
|
SRR6045613
|
Other
|
lineage3.1.3
|
None
|
SRR6045966
|
Other
|
lineage3.1.3
|
gb
|
SRR6045779
|
Sensitive
|
lineage3.1.3
|
gb
|
SRR6045947
|
Sensitive
|
lineage3.1.3
|
gb
|
SRR6045713
|
Sensitive
|
lineage3.1.3
|
gb
|
SRR6045741
|
Sensitive
|
lineage3.1.3
|
gb
|
SRR6045844
|
Other
|
lineage3.1.3
|
None
|
SRR6044956
|
Sensitive
|
lineage3.1.3
|
gb
|
SRR6045065
|
Sensitive
|
lineage3.1.3
|
gb
|
SRR6045997
|
Other
|
lineage3.1.3
|
gb
|
ERR4829695
|
HR-TB
|
lineage4.1.2.1
|
it
|
SRR6046400
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4830109
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4828794
|
Sensitive
|
lineage3.1.3
|
None
|
ERR278601
|
Other
|
lineage3.1.3
|
None
|
ERR11049776
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4829518
|
Sensitive
|
lineage3.1.3
|
it
|
ERR4829803
|
HR-TB
|
lineage3.1.3
|
it
|
ERR4830747
|
MDR-TB
|
lineage3.1.3
|
ir
|
SRR6046753
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4828954
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR6152778
|
Sensitive
|
lineage3.1.3
|
ca
|
ERR294217
|
Sensitive
|
lineage3.1.3
|
None
|
SRR6153073
|
Sensitive
|
lineage3.1.3
|
ca
|
SRR6153207
|
Sensitive
|
lineage3.1.3
|
ca
|
ERR294238
|
Other
|
lineage3.1.3
|
None
|
ERR294228
|
Sensitive
|
lineage3.1.3
|
None
|
ERR023745
|
Sensitive
|
lineage3.1.3
|
nl
|
ERR550710
|
Sensitive
|
lineage3.1.3
|
de
|
SRR6797771
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11067570
|
Sensitive
|
lineage3.1.3
|
None
|
SRR7592340
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR023742
|
Sensitive
|
lineage3.1.3
|
None
|
ERR072054
|
Sensitive
|
lineage3.1.3
|
None
|
ERR028341
|
Sensitive
|
lineage3.1.3
|
None
|
ERR072101
|
Sensitive
|
lineage3.1.3
|
None
|
ERR072055
|
Other
|
lineage3.1.3
|
None
|
ERR072043
|
Sensitive
|
lineage3.1.3
|
None
|
ERR072066
|
Other
|
lineage3.1.3
|
None
|
ERR1035160
|
Sensitive
|
lineage3.1.3
|
sa
|
ERR1035164
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11043220
|
Sensitive
|
lineage3.1.3
|
None
|
ERR10465903
|
HR-TB
|
lineage3.1.3
|
None
|
ERR11043118
|
Sensitive
|
lineage3.1.3
|
None
|
ERR1035170
|
Sensitive
|
lineage3.1.3
|
sa
|
ERR11043245
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11043391
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11043956
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11043821
|
MDR-TB
|
lineage3.1.3
|
None
|
ERR11043932
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11044118
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11043965
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11044704
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11044206
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11044591
|
Sensitive
|
lineage3.1.3
|
None
|
ERR11044642
|
MDR-TB
|
lineage3.1.3
|
None
|
ERR11044860
|
Sensitive
|
lineage3.1.3
|
None
|
ERR114465
|
Other
|
lineage4.8.2;lineage3.1.3
|
None
|
ERR11044944
|
Sensitive
|
lineage3.1.3
|
None
|
ERR114466
|
Other
|
lineage3.1.3;lineage3.1.1
|
None
|
ERR117717
|
MDR-TB
|
lineage3.1.3
|
None
|
ERR114503
|
HR-TB
|
lineage3.1.3
|
None
|
ERR117643
|
Sensitive
|
lineage3.1.3
|
None
|
ERR117713
|
Sensitive
|
lineage3.1.3
|
None
|
ERR117712
|
Sensitive
|
lineage3.1.3
|
None
|
ERR123936
|
Sensitive
|
lineage3.1.3
|
None
|
ERR330718
|
Sensitive
|
lineage3.1.3
|
None
|
ERR3335761
|
Pre-XDR-TB
|
lineage3.1.3
|
pk
|
ERR330736
|
Other
|
lineage3.1.3
|
None
|
ERR3335748
|
Pre-XDR-TB
|
lineage3.1.3
|
pk
|
ERR330726
|
Other
|
lineage3.1.3
|
None
|
ERR3335735
|
Pre-XDR-TB
|
lineage3.1.3
|
pk
|
ERR3335755
|
Pre-XDR-TB
|
lineage3.1.3
|
pk
|
ERR386903
|
Sensitive
|
lineage3.1.3
|
None
|
ERR3335774
|
Pre-XDR-TB
|
lineage3.1.3
|
pk
|
ERR386960
|
Other
|
lineage3.1.3
|
None
|
ERR400337
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR387019
|
Other
|
lineage3.1.3
|
None
|
ERR400314
|
Sensitive
|
lineage3.1.3
|
gb
|
ERR4797330
|
Sensitive
|
lineage3.1.3
|
in
|
ERR4797161
|
Sensitive
|
lineage3.1.3
|
in
|
ERR4797248
|
Sensitive
|
lineage3.1.3
|
in
|
ERR403341
|
Other
|
lineage3.1.3
|
None
|
ERR403405
|
Other
|
lineage3.1.3
|
None
|
ERR4796489
|
Sensitive
|
lineage3.1.3
|
in
|
ERR4797416
|
Sensitive
|
lineage3.1.3
|
in
|
ERR4797644
|
HR-TB
|
lineage3.1.3
|
in
|
ERR4798449
|
Sensitive
|
lineage3.1.3
|
in
|
ERR4797706
|
Sensitive
|
lineage3.1.3
|
in
|
ERR4800387
|
MDR-TB
|
lineage3.1.3
|
None
|
ERR4799115
|
Sensitive
|
lineage3.1.3
|
in
|
ERR4799253
|
Sensitive
|
lineage3.1.3
|
in
|
ERR4799813
|
Sensitive
|
lineage3.1.3
|
in
|
ERR9117743
|
Sensitive
|
lineage3.1.3
|
None
|
ERR5979439
|
Sensitive
|
lineage3.1.3
|
None
|
ERR9125309
|
HR-TB
|
lineage3.1.3
|
None
|
ERR9117754
|
Sensitive
|
lineage3.1.3
|
None
|
ERR9117775
|
HR-TB
|
lineage3.1.3
|
None
|
ERR9117781
|
Other
|
lineage3.1.3
|
None
|
ERR9117826
|
Other
|
lineage3.1.3
|
None
|
ERR9117824
|
Sensitive
|
lineage3.1.3
|
None
|
ERR9125814
|
Sensitive
|
lineage3.1.3
|
None
|
ERR9125798
|
Sensitive
|
lineage3.1.3
|
None
|
ERR9125822
|
Sensitive
|
lineage3.1.3
|
None
|