EBG00000313339 - n.60G>T
Drug resistance types
50 Sensitive
2 RR-TB
12 HR-TB
10 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 40 |
| lineage2.2.1.1 | 2 |
| 15 | |
| lineage4.3.4.2.1 | 4 |
| lineage4.9 | 4 |
| lineage4.3.2.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.6.2.2 | 5 |
| lineage3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 9 |
| lineage4.8 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage5.2 | 2 |
| lineage4.1 | 1 |
| lineage4.1.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341366 | Sensitive | lineage4 | None | ERR2512444 | Sensitive | lineage2.2.1.1 | gb | SRR5341453 | Sensitive | None | ERR4817488 | Other | lineage4.3.4.2.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR4033811 | Sensitive | lineage4.3.2.1 | za | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819423 | Other | lineage4.6.2.2 | None | SRR5341387 | Other | lineage4 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR5341425 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341300 | Other | lineage4 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821286 | Other | lineage4.8 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5535926 | HR-TB | lineage1.2.2.2 | None | SRR6045892 | Sensitive | None | ERR4821655 | Sensitive | lineage4 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6339652 | HR-TB | lineage4.1.1.3 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4831987 | MDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9613540 | Sensitive | lineage4.6.2.2 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR502510 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR323115 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR3273109 | MDR-TB | lineage4 | None | ERR4024991 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR6358979 | Other | None | ERR4798099 | Other | None | ERR5865400 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR736872 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR7801203 | Sensitive | lineage4.3.4.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR10808805 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1167271 | MDR-TB | lineage4.1.1.3 | None | SRR1173568 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR3675246 | Sensitive | lineage4 | None | SRR1791747 | Other | La1.8.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4816110 | Sensitive | lineage4.9 | gb | ERR4814963 | Other | lineage4.1.2.1 | None |
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