lineage | Count |
---|---|
lineage3.1 | 1 |
lineage4.8 | 5 |
lineage3 | 5 |
10 | |
lineage3.1.2.1 | 1 |
lineage4.3 | 1 |
lineage4 | 12 |
lineage4.9 | 47 |
lineage3.1.3 | 3 |
lineage1.1.1 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage1.1.2 | 1 |
lineage4.1 | 1 |
lineage4.1.1.3 | 2 |
lineage2.2.1 | 6 |
lineage4.1.2.1 | 2 |
lineage1.1.1.1 | 1 |
La1.2 | 1 |
La1.7.X-unk4 | 1 |
lineage4.9;La1.3 | 1 |
lineage4.6.5 | 1 |
lineage1.1.3.1 | 1 |
lineage4.1.4 | 1 |
La1.8.1 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 1 |
lineage2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage4.2.2 | 1 |
lineage4.4.2;lineage4.2.2;lineage2.2.1 | 1 |
lineage4.4.2 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage1.2.1.1 | 1 |
lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | ERR2027290 | RR-TB | lineage3.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | ERR4817069 | RR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4815815 | Sensitive | lineage4 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2432997 | Other | lineage4.8 | None | ERR4818561 | HR-TB | lineage4 | None | ERR2513259 | Other | lineage3 | None | ERR1023509 | Other | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6045892 | Sensitive | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR7535082 | Sensitive | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR067712 | HR-TB | lineage4 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7851312 | Other | La1.2 | None | ERR4188247 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3439265 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4797474 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9901813 | RR-TB | lineage4.1.4 | None | SRR1172717 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR15316270 | Sensitive | lineage4.2.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR18002873 | Pre-XDR-TB | lineage4.4.2;lineage4.2.2;lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675475 | Other | lineage4.1.1.3 | None | ERR4815310 | Other | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4815550 | Other | lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None |
---|