lineage | Count |
---|---|
lineage4 | 33 |
lineage2.2.1 | 7 |
lineage4.3.4.2.1 | 2 |
lineage4.9.1 | 1 |
29 | |
lineage2.2 | 3 |
lineage4.1.2.1 | 2 |
lineage4.1.2 | 1 |
lineage4.4.1.2 | 1 |
lineage4.3.4.1 | 1 |
lineage4.9 | 52 |
La1.8.1 | 1 |
lineage4;lineage3.1 | 1 |
La1.3 | 1 |
lineage1.1.2 | 1 |
lineage2.2.2 | 1 |
lineage4.3.4 | 1 |
lineage1.1.3.1 | 1 |
lineage6 | 1 |
lineage4.3.4.2 | 1 |
lineage4.8 | 2 |
lineage4.6.1.2 | 1 |
lineage4.1.1.3 | 1 |
lineage3 | 4 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage4.2.2.1 | 1 |
lineage4.2.1 | 1 |
La1.7.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage1.2.1.1 | 1 |
lineage3.1.3 | 1 |
lineage2.1 | 1 |
lineage4.1.1.2 | 1 |
lineage1.1.1 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 162 |
ID | Drug resistance | Lineage | Country iso2 | ERR133825 | Sensitive | lineage4 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR1034652 | Other | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR11465580 | Sensitive | lineage4.3.4.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4188247 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9119669 | HR-TB | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173213 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR16149129 | MDR-TB | lineage4.2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR176779 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | ERR176778 | HR-TB | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | ERR4815550 | Other | lineage4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816470 | Other | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4819051 | Other | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR6045892 | Sensitive | None | ERR4819357 | Other | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | ERR1035138 | MDR-TB | None | ERR4819933 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045010 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046210 | Other | lineage4 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None |
---|