Rv0006 - c.1227G>C


Drug resistance types
12 Sensitive 1 RR-TB 64 HR-TB 16 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 84 Other
lineage Counts
lineage Count
lineage4 10
lineage3 5
lineage4;lineage3.1 1
84
lineage4.9 12
lineage2.2.1 14
La1.2 2
lineage2 3
lineage4.9;La1.3 1
lineage4.6.1.1 1
lineage1.1.3.1 1
lineage2.2 6
lineage1.1.2 1
lineage4.1.2.1 10
lineage4.3.2 1
lineage5.2 2
lineage4.8 1
lineage4.1.3 2
lineage4.6.2.2 3
lineage4.8;lineage4.1 2
lineage6 1
lineage6.3.1 1
lineage2.2.1.1 2
lineage3.1 1
lineage1.2.1.2 1
lineage2.1 2
lineage4.5 1
lineage4.9;La3 1
lineage4.1.1 1
lineage6.3;lineage2.2.1 1
lineage4.9;La1 1
lineage4.2;La1.7 1
lineage4.3.4.2.1 1
lineage1.2.1.1 1
La1.8.1 1
lineage3.1.3 1
lineage4.7 1
La1 1
spoligotype Counts
spoligotype Count
None 182
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR405209 Sensitive lineage4 None
ERR4407452 Sensitive lineage3 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4407463 HR-TB None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4769497 HR-TB La1.2 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797588 MDR-TB lineage3 None
ERR4769474 HR-TB lineage4 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4811105 HR-TB None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR4811142 MDR-TB None
ERR6358979 Other None
ERR6866410 Sensitive None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736839 Other None
ERR6866547 Sensitive lineage4 None
ERR702406 HR-TB None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786601 Other lineage4.1.2.1 None
ERR9117805 Other lineage4.3.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119669 HR-TB None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786604 Other None
ERR9786843 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9787197 Other None
ERR9787165 Other lineage6 None
ERR9787139 Other lineage6.3.1 None
SRR1172857 MDR-TB None
SRR1172817 HR-TB None
SRR1169194 Other None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1173400 Other None
SRR1173384 Other lineage4 None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1173633 HR-TB lineage4.9 None
SRR1175074 MDR-TB None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173788 Other None
SRR1173778 Other None
SRR1180137 Other lineage2.2.1 None
SRR1175506 Sensitive lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1181020 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183144 Other lineage2.2.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184381 MDR-TB None
SRR1184372 MDR-TB None
SRR1196494 MDR-TB None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196546 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR12006550 Other lineage1.2.1.2 None
SRR1196768 MDR-TB None
SRR12142341 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR1710057 Other lineage2.1 None
SRR15368973 Other None
SRR18213713 HR-TB lineage4.5 None
SRR19303884 HR-TB None
SRR18910194 HR-TB lineage2.2 None
SRR26399973 Other lineage4.9;La3 None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
ERR176793 Other lineage4.1.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR23961542 Other lineage4.9;La1 None
SRR23961559 Other lineage4.2;La1.7 None
SRR23961549 Other La1.2 None
ERR4815604 HR-TB None
SRR3675465 HR-TB None
SRR3675488 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3416776 Other lineage2.1 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675222 Other None
SRR3675501 HR-TB None
SRR3675221 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
SRR3675236 HR-TB None
SRR3675311 Other None
SRR3675232 Other lineage4.1.2.1 None
ERR2027263 Other lineage4 None
ERR4816999 Other None
ERR4817037 Other lineage4.9 None
SRR3675574 HR-TB None
ERR212001 HR-TB None
SRR3675572 Other None
ERR4818021 Other La1.8.1 None
ERR4816585 Other lineage2.2 None
SRR7496472 Other None
SRR3742665 HR-TB None
ERR4817896 HR-TB lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2514821 Other lineage2.2.1 None
SRR5007188 Other lineage4 None
ERR2514692 Other None
SRR5341302 HR-TB None
ERR234659 HR-TB None
ERR4818393 RR-TB lineage3 None
SRR5341456 Other None
ERR4819781 Other lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR5341333 HR-TB None
SRR6044790 HR-TB None
SRR6045577 Sensitive lineage4.9 None
ERR4821053 Other lineage3 None
SRR6045526 HR-TB None
SRR6045892 Sensitive None
SRR6044876 Sensitive lineage4 None
SRR6044855 Other lineage4.9 None
SRR6046305 Other lineage4.9 None
SRR6046210 Other lineage4 None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046362 HR-TB None
SRR6046299 HR-TB None
SRR6046540 HR-TB None
ERR4830353 Other None
SRR6046460 HR-TB None
SRR6046397 Other None
SRR6785267 Other lineage2.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR502532 HR-TB None
SRR6789626 Other None
SRR7496509 Other None
ERR323043 HR-TB None
SRR7496523 Other lineage4.7 None
SRR7496517 Other None
ERR1063883 Sensitive lineage4 None
ERR1035157 Other lineage4.9 None
ERR3283010 Other La1 None
ERR133825 Sensitive lineage4 None
ERR3283040 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283027 HR-TB None
ERR5336148 Other None
ERR3797015 HR-TB None
ERR3283036 HR-TB None
ERR3797069 Other None
ERR3804169 HR-TB lineage4.1.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None