Rv3596c - c.1599G>T
Drug resistance types
44 Sensitive
4 RR-TB
18 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 53 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.1.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.8 | 2 |
| lineage3 | 6 |
| lineage2.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage3.1.3 | 2 |
| lineage4.2;lineage4.9 | 2 |
| 1 | |
| lineage2.2.1 | 3 |
| lineage4 | 2 |
| La2;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage6.1.1 | 2 |
| lineage2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 100 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045217 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR6046046 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR3675270 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR29096150 | Other | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR736848 | Other | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR161037 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None |
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