Rv0668 - c.-162T>C
Drug resistance types
29 Sensitive
0 RR-TB
26 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 46 |
| La3;lineage4.9 | 6 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage3.1.3 | 1 |
| La1.7;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| La1.2;La1.8.1 | 1 |
| La3;lineage4.3.4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.6.1.1 | 2 |
| lineage2.2.1 | 1 |
| lineage4.1.1.2 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13285068 | Sensitive | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR926163 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046485 | Other | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR11252736 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None |
|---|
