Rv3696c - c.981C>T
Drug resistance types
10 Sensitive
0 RR-TB
9 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 9 |
| lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 9 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.2 | 1 |
| lineage2.2.2 | 1 |
| La3;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage3 | 1 |
| La1.7 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| La1.7.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR10040411 | MDR-TB | lineage2.2.2 | None | ERR3283028 | Other | La3;lineage4 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR400529 | Other | lineage3 | None | ERR4830353 | Other | La1.7 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None |
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