Rv0006 - c.222C>A


Drug resistance types
9 Sensitive 0 RR-TB 69 HR-TB 7 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 63 Other
lineage Counts
lineage Count
70
lineage2.2.1 8
lineage1.2.1.1 1
lineage4 15
lineage4.9 11
lineage2.1 1
lineage2.2 1
lineage4.4.1.1 2
lineage3.1.3 1
La1.8.1 1
lineage4.8 3
lineage4.1.2 1
lineage3 3
lineage4;lineage1.1 1
lineage4.1.2.1 9
lineage4.9;lineage3.1.2.1 1
lineage4.7 2
lineage4.2.1.1 1
lineage4.1 1
La1.6 1
lineage4.4.1.2 1
La1 1
lineage4.1.3 2
lineage4.6.1.1 1
lineage4.3.4 1
lineage1.1.2 1
lineage4.3.2 1
lineage4.6.2.2 1
lineage6 1
lineage6.3.1 1
lineage2.2.1.1 2
lineage4.5 1
lineage7;lineage2.2.1.2 1
lineage2 1
spoligotype Counts
spoligotype Count
None 150
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675465 HR-TB None
ERR176779 HR-TB None
ERR4815604 HR-TB None
ERR176778 HR-TB None
SRR3675311 Other None
ERR158583 HR-TB None
SRR3675221 HR-TB None
SRR3675236 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR181824 HR-TB lineage4 None
ERR181887 HR-TB None
ERR212034 HR-TB None
ERR176651 HR-TB None
ERR4815752 Other lineage4.9 None
SRR3675550 Other None
ERR4816999 Other None
SRR5341422 HR-TB lineage2.1 None
ERR212125 HR-TB lineage4 None
SRR3675572 Other None
SRR3675571 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4816585 Other lineage2.2 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR7496472 Other None
ERR4817896 HR-TB lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818021 Other La1.8.1 None
ERR2510820 Other lineage4.8 None
ERR4818615 Other None
ERR1035162 Other None
ERR4818347 Other lineage4.1.2 None
SRR5341408 Sensitive lineage3 None
SRR5341373 HR-TB lineage4 None
ERR4819322 Other lineage4;lineage1.1 None
SRR5007188 Other lineage4 None
SRR5341400 HR-TB lineage4 None
ERR4820335 Other lineage4.1.2.1 None
SRR5341432 HR-TB lineage4 None
SRR5341418 Other None
ERR2514390 Sensitive lineage4.9;lineage3.1.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR5341293 HR-TB lineage4 None
SRR6044855 Other lineage4.9 None
SRR5341313 HR-TB None
SRR5341315 Sensitive None
ERR4820854 Other lineage4.1.2.1 None
SRR6045892 Sensitive None
ERR4819932 Other lineage4.7 None
SRR5341333 HR-TB None
SRR5341330 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6046305 Other lineage4.9 None
SRR6046210 Other lineage4 None
SRR6046066 HR-TB None
SRR6046540 HR-TB None
SRR6046397 Other None
SRR6046482 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6046492 Other None
SRR6046824 HR-TB None
SRR6785267 Other lineage2.2.1 None
ERR4831117 HR-TB None
SRR7535086 Other None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR502532 HR-TB None
ERR502889 Other None
SRR7131096 Other lineage4.8 None
SRR6789624 MDR-TB lineage4.1 None
SRR6981961 Sensitive lineage2.2.1 None
ERR11268038 Other La1.6 None
SRR7496509 Other None
SRR7496517 Other None
SRR7496523 Other lineage4.7 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323043 HR-TB None
ERR1035157 Other lineage4.9 None
ERR067681 HR-TB None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR1063858 HR-TB None
ERR1063862 HR-TB None
ERR1063859 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283010 Other La1 None
ERR133986 HR-TB None
ERR3283013 MDR-TB lineage4 None
ERR3283041 Other lineage4.9 None
ERR3283027 HR-TB None
ERR3283025 HR-TB None
ERR3283036 HR-TB None
ERR3283055 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3445501 HR-TB None
ERR3439432 Other None
ERR3797046 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR5336148 Other None
ERR3797058 Other lineage4.9 None
ERR3797086 Other lineage4.9 None
ERR3797069 Other None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4769474 HR-TB lineage4 None
ERR403298 HR-TB lineage4 None
ERR4800341 Other lineage3 None
ERR4797588 MDR-TB lineage3 None
ERR4798406 HR-TB None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR736867 HR-TB None
ERR4810741 HR-TB None
ERR4811493 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR702406 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR6359045 HR-TB None
ERR736875 HR-TB lineage4 None
ERR9786421 Other lineage4.1.2.1 None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9786604 Other None
ERR9786569 Other lineage4.8 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9787165 Other lineage6 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
SRR1184372 MDR-TB None
SRR1173118 Other None
SRR1173788 Other None
SRR1183106 Other lineage2.2.1.1 None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1173633 HR-TB lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR12416824 HR-TB None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19304036 HR-TB None
SRR19303884 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR26399490 Sensitive lineage4.9 None