Rv0006 - c.222C>A


Drug resistance types
7 Sensitive 1 RR-TB 33 HR-TB 16 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 79 Other
lineage Counts
lineage Count
La1.7;lineage4.9 4
La1.7.1;lineage4.9 1
lineage2.2.1 6
lineage4.9 32
lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage3 2
lineage2.1;lineage4.9;lineage6.3 5
lineage4.1.2.1 9
11
La1.6;lineage4 1
lineage4.9;lineage6.3 2
lineage3.1.3 1
lineage3.1.2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.7 1
lineage2.1;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 9
La1.7.1;La1.7.X-unk4 1
La1.6 1
lineage1.2.2.2 1
lineage4.4.1.1 2
lineage2.2.1.2;lineage7 1
La1.7;lineage4.9;lineage7 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9;lineage7 2
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.4.1.2 1
lineage4.6.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage6.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1 1
lineage1.1;lineage4 1
lineage4 1
lineage4.1.3 2
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage6.1.3 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage4.3.4 1
La1.7.X-unk4;lineage4.9 1
La3;lineage1.1.2 1
lineage4.8 1
lineage1.2.1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage4.1.1.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2 1
spoligotype Counts
spoligotype Count
None 137
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4797588 MDR-TB lineage3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675311 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR18213713 HR-TB None
SRR28351554 Other La1.6;lineage4 None
SRR3675236 Other None
ERR4816999 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR176651 Other lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR5341400 Sensitive lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR6046305 Sensitive lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR11268038 Other La1.6 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR7496472 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR176779 HR-TB lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR4811493 HR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR181824 MDR-TB lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR9786604 Other None
SRR5341373 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR181887 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR4769474 HR-TB lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675457 Other lineage4.9 None
ERR9787165 Other lineage6.1.3 None
ERR212125 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR7496509 Other None
ERR9786671 Other None
ERR9117709 Other None
SRR7535086 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675275 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675549 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR9786569 Other lineage4.8 None
ERR4814734 Other lineage1.2.1.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4820335 Other lineage4.1.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR26399490 Sensitive lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4820854 Other lineage4.1.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR6046210 Other lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None