EBG00000313325 - n.183A>G
Drug resistance types
11 Sensitive
7 RR-TB
22 HR-TB
5 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 2 |
| lineage2.2.1 | 7 |
| lineage4.9 | 24 |
| La3;lineage4.9 | 8 |
| lineage1.2.2.2 | 1 |
| La1.7.1 | 2 |
| lineage1.1.2 | 2 |
| 2 | |
| La1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 3 |
| La1.3 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8 | 2 |
| lineage1.1.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;lineage4 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage5.2 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.3.3 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.5 | 1 |
| La1.2.BCG | 1 |
| lineage2.2 | 1 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR3275231 | Other | La1.7.1 | nl | SRR2010514 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446159 | Other | La1.7.1 | nl | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4769493 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR502895 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4769495 | Other | La1.3 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR1063896 | HR-TB | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR6046492 | Other | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR18715250 | Sensitive | lineage4.8 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR2693252 | HR-TB | lineage4.9 | None |
|---|
