Rv3596c - c.1179G>C
Drug resistance types
70 Sensitive
9 RR-TB
61 HR-TB
13 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1 | 2 |
| lineage2.2.1 | 15 |
| lineage4 | 8 |
| 39 | |
| lineage3 | 5 |
| lineage4;lineage1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.9 | 66 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2.1 | 12 |
| lineage1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage3.1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8.1 | 1 |
| La1.8.1 | 2 |
| La1 | 1 |
| La1.3 | 5 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.3 | 3 |
| lineage2.2.2 | 2 |
| lineage4.6.5 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage2 | 2 |
| lineage4.8;lineage4.3.3 | 2 |
| lineage4.8 | 17 |
| lineage4.6.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.2.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 210 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819314 | Other | lineage1.1.1 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR2693239 | HR-TB | None | ERR4819546 | HR-TB | lineage3 | None | ERR4821053 | Other | lineage3 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR2206051 | Sensitive | lineage4.3.2 | None | SRR6045450 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | ERR4821620 | Sensitive | lineage4.1.1.3 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045952 | HR-TB | None | SRR6046015 | Other | lineage4.9 | None | SRR6325442 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045399 | Other | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6046385 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6325448 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046839 | Other | lineage4.9 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6257068 | Sensitive | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | SRR6785157 | Sensitive | lineage4.2.1 | None | SRR6785189 | Other | lineage4.1.2.1 | None | SRR6785436 | Sensitive | lineage2.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8420475 | HR-TB | lineage4.4.1.1 | None | ERR323041 | HR-TB | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR036207 | Other | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4769516 | Other | La1.3 | None | ERR4188350 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR6358837 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736839 | Other | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119669 | HR-TB | None | SRR1002695 | Sensitive | lineage2.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR9893454 | Other | lineage3 | None | SRR069989 | HR-TB | lineage2 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972177 | Pre-XDR-TB | None | SRR11972371 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR124451 | HR-TB | None | SRR124453 | HR-TB | None | SRR13837638 | Other | lineage4.9 | None | SRR13837548 | Sensitive | lineage4.9 | None | SRR13837630 | Sensitive | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13837642 | RR-TB | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861636 | Sensitive | lineage4.9 | None | SRR13861553 | Sensitive | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861666 | Sensitive | lineage4.9 | None | SRR16149128 | MDR-TB | lineage4.2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR2229577 | Sensitive | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675545 | HR-TB | None | ERR2228998 | Sensitive | lineage4.8 | None | ERR4816151 | Other | lineage4.8 | None | ERR2229092 | Other | lineage4.8 | None | ERR2229034 | Sensitive | lineage4.8 | None | ERR2229813 | Sensitive | lineage4.8 | None | ERR2229129 | Other | lineage4.8 | None | ERR2229578 | Sensitive | lineage4 | None | ERR2229175 | Other | lineage4.8 | None | SRR3675558 | HR-TB | None | ERR2229156 | Sensitive | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | ERR4816466 | HR-TB | None | ERR2229200 | Sensitive | lineage4.8 | None | SRR3732641 | MDR-TB | lineage4.3.3 | None | ERR2229766 | Sensitive | lineage4.8 | None | ERR2229768 | Sensitive | lineage4 | None | ERR2229313 | Sensitive | lineage4.8 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2229411 | Sensitive | lineage4 | None | ERR2229424 | Sensitive | lineage4.8 | None | ERR2228919 | Sensitive | lineage4.8 | dk | ERR2229380 | Sensitive | lineage4.8 | None | ERR4816852 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None |
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