Rv3596c - c.1179G>C


Drug resistance types
24 Sensitive 29 RR-TB 8 HR-TB 87 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 15 Other
lineage Counts
lineage Count
La3;M.canetti;lineage3.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage2.2.1 6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9 36
M.canetti;lineage2.1;lineage4.9 24
La3;M.canetti;lineage4.9 2
lineage2.1;lineage2.2;lineage6.3 1
lineage4.4.1.1.1 1
lineage2.1;lineage4.9 5
M.canetti;lineage2.1;lineage4 1
lineage2.2.2 1
lineage4.1.2.1 8
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.6.5 2
lineage3.1.2.1 1
M.canetti;lineage4.9 3
La1.8.1 2
lineage2.2.1;lineage4 1
lineage4 2
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.5 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage2.2.1;lineage4.9 2
lineage4.3.4.2.1 1
lineage2.1;lineage4.9;lineage6.3 1
lineage1.1 1
La1.7.1 1
lineage4.3.3 2
1
lineage4.4.1.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La3;M.canetti;lineage2.1;lineage3.1 1
lineage3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
lineage4.8 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.1.1.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1.2.1.1 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage3 1
La1.7;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.8.1 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.2.1 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 166
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28351584 HR-TB lineage2.2.1 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR13861288 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR1162740 Other lineage4.1.2.1 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR7801175 HR-TB lineage4.6.5 None
SRR1181402 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR4798823 HR-TB lineage4 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1180977 Sensitive lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR1175512 Sensitive lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR3468607 RR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR7240492 MDR-TB La1.7.1 None
SRR1180410 Sensitive lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR1640750 RR-TB None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4821179 Other lineage4.1.2.1 gb
SRR1173453 Other lineage4.4.1.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR7801176 RR-TB lineage4.6.5 None
ERR2693228 RR-TB lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR3797086 Sensitive lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
SRR13861332 Other lineage4.9 None
ERR2509673 Other lineage2.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR13861553 RR-TB lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 MDR-TB lineage4.1.2.1 None
SRR1180399 Sensitive lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None