lineage | Count |
---|---|
lineage4 | 3 |
lineage4.9 | 17 |
lineage2.2.1 | 5 |
lineage4.4.2 | 2 |
lineage1.1.2 | 1 |
lineage1.1.3.1 | 1 |
lineage3 | 4 |
lineage4.9;lineage4.2.1 | 1 |
lineage4.2.1.1 | 1 |
lineage4.1.1.3 | 1 |
La1.8.1 | 1 |
lineage4.3.3 | 1 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
lineage4.8;lineage4.3.3 | 3 |
lineage4.3.4.2.1 | 1 |
1 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4818261 | Other | lineage1.1.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR1049672 | Other | lineage3 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4821276 | Other | lineage3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR036207 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140736 | RR-TB | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None |
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