Rv0006 - c.-578G>C


Drug resistance types
40 Sensitive 3 RR-TB 39 HR-TB 3 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
La1.6;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9 61
lineage2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage4.8 2
lineage4.4.1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
lineage2.2.1;lineage4 1
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
La1.7;lineage4.9 3
lineage4 1
lineage4.1.2.1 2
lineage2.2.1 6
lineage4.2;lineage4.8.1;lineage4.9 2
La1.4 1
lineage4.3.4.1 1
lineage4.3.4.2.1 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1;lineage4.9 1
lineage4.5 1
lineage2.2 1
lineage4.3.4 1
lineage2.2.1.2 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7;lineage4.9;lineage7 2
lineage4.1.1.3 1
La1.7;lineage3.1;lineage4 1
La1.8.1 1
La1.7.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage1.1.2 1
lineage2.2.1.1 1
lineage4.2;lineage4.9 2
lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 111
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28351554 Sensitive La1.6;lineage4 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4818929 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3283040 HR-TB lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180444 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6046492 Other lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR926158 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926161 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR971389 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR29096246 Sensitive La1.7;lineage4.9 None
SRR9971080 RR-TB lineage2.2.1 None
SRR1180413 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR16278274 Other La1.4 None
SRR1181351 Sensitive lineage4.9 None
ERR11465579 Sensitive lineage4.3.4.1 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4769497 Other La1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR1180312 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR3797029 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR12142339 HR-TB lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1180391 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR6045191 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4188247 HR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
ERR4769474 HR-TB lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR12708392 Other lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1063849 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR4797193 HR-TB lineage1.1.2 None
SRR21677886 Sensitive lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR5311094 HR-TB lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR10315551 Sensitive lineage2.2.1 None
ERR4796929 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None