EBG00000313339 - n.1424C>T
Drug resistance types
68 Sensitive
15 RR-TB
27 HR-TB
16 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 23 |
| lineage4.9 | 69 |
| lineage4 | 13 |
| lineage4.1.2.1 | 1 |
| lineage1.1.1 | 3 |
| La1.8.1 | 12 |
| lineage4.3.3 | 4 |
| lineage4.8 | 6 |
| lineage4.3.2.1 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.2 | 2 |
| La2 | 1 |
| 4 | |
| La1.4 | 1 |
| lineage4.4 | 1 |
| lineage4.4.1.1 | 2 |
| lineage3 | 10 |
| lineage4.3.4.2.1;lineage4.3.2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4;lineage2 | 2 |
| lineage2.2.2 | 2 |
| lineage4.6.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.1 | 1 |
| lineage4.7 | 1 |
| lineage4.2.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage1.1.3.3 | 1 |
| La1.3 | 6 |
| La1 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 202 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5864958 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR736837 | Other | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR10482948 | Other | La1.8.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR11972447 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR13888750 | Other | La2 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR16278273 | Other | La1.4 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR9806974 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR17832798 | Other | lineage3 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR2100537 | Sensitive | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2101468 | Sensitive | lineage4.3.4.2.1;lineage4.3.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR8025632 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR4815310 | Other | None | ERR4814639 | HR-TB | lineage4 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR1750921 | Sensitive | lineage4.1.1.3 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR4815550 | Other | lineage4 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR211997 | Sensitive | lineage3.1.1 | mw | ERR4816964 | Other | lineage4.9 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4816762 | Other | lineage4;lineage2 | None | ERR228180 | Sensitive | lineage3 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2510600 | Pre-XDR-TB | lineage3 | pk | ERR4818710 | Sensitive | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | SRR5341460 | Other | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2515416 | Sensitive | lineage2.2.1 | None | ERR4820766 | Other | lineage4.8 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR323037 | HR-TB | lineage4 | None | ERR2514485 | Sensitive | lineage4.6.3 | gb | SRR5520600 | HR-TB | lineage2.2.1.1 | pg | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR4830672 | MDR-TB | lineage4.3.1 | dz | ERR4829573 | Sensitive | lineage4.7 | it | SRR5341288 | Pre-XDR-TB | lineage3 | None | ERR1023509 | Other | None | SRR6046839 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR495008 | Sensitive | lineage4.4.1.1.1 | None | SRR6856097 | Sensitive | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6896542 | Sensitive | lineage4.3.4.2.1;lineage4.3.2.1 | None | ERR502523 | Other | lineage6.3.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR8600071 | Other | La1.8.1 | None | ERR5087707 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR4187916 | Other | La1.8.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR144568 | Pre-XDR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR4187636 | Other | La1.8.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4188035 | Other | La1.8.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4796257 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR5864957 | MDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4800222 | Sensitive | lineage1.1.2 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
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