lineage | Count |
---|---|
lineage4.4.1.2 | 1 |
La1.7.X-unk4 | 1 |
lineage4.9 | 12 |
lineage2.2.2 | 1 |
La1.8.1 | 2 |
lineage2.2.1 | 9 |
lineage4.9.1 | 1 |
lineage4.6.1.2 | 4 |
3 | |
lineage3 | 3 |
lineage4.4 | 1 |
lineage4.9;lineage3.1.1 | 1 |
lineage4.3 | 1 |
lineage3.1.2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.3 | 2 |
lineage4.7 | 1 |
lineage4.8 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 47 |
ID | Drug resistance | Lineage | Country iso2 | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR16156832 | RR-TB | None | SRR1173719 | HR-TB | lineage3 | None | SRR1180440 | Other | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR1173310 | MDR-TB | None | SRR1180446 | Other | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4815556 | RR-TB | lineage3 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4817069 | RR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6045928 | Other | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR10748430 | MDR-TB | lineage2.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None |
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