lineage | Count |
---|---|
lineage4.9 | 22 |
lineage4.9;La1.3 | 1 |
lineage4 | 2 |
La1.8.1 | 1 |
lineage4.6.1.1 | 1 |
lineage2.2.1 | 4 |
4 | |
lineage2.2.2 | 1 |
lineage4.3.3 | 1 |
lineage3 | 7 |
lineage4.1.2.1 | 1 |
lineage4.8;lineage4.3.3 | 3 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage2.2 | 2 |
La1.4 | 1 |
lineage4.9;lineage3.1.1 | 1 |
lineage4.5 | 1 |
lineage3.1.2.1 | 1 |
lineage4.8 | 1 |
lineage3.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.9;lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 61 |
ID | Drug resistance | Lineage | Country iso2 | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | SRR6045267 | RR-TB | lineage4 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6197022 | Other | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140736 | RR-TB | None | SRR1062928 | RR-TB | lineage4 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4820833 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819456 | Other | lineage4.8 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4820030 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None |
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