EBG00000313325 - n.616G>C


Drug resistance types
48 Sensitive 15 RR-TB 32 HR-TB 13 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 71 Other
lineage Counts
lineage Count
lineage1.1.1 2
lineage3 13
lineage4.4.1.1 7
lineage4.8 10
20
lineage6.1.3 1
lineage4.1.1.3 2
lineage3.1.2.2 1
lineage4.2.1 1
lineage4.9 65
lineage4.3.4.2.1 3
lineage4 8
lineage4.3.3 4
lineage4.1.2.1 4
lineage4.3.4.1 2
lineage4.8.1 1
La2 1
lineage2.2.1 17
lineage4.4.1.2 1
lineage4;lineage3.1 1
La1.2 1
La1.3 1
lineage4.9;La1.3 1
lineage3.1.2 1
lineage4.5;lineage2.2.1 1
lineage4.3.4.2 1
lineage4.6.5 2
lineage6 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.4.1.1.1 2
lineage4.9;lineage2.2 1
lineage2.2 1
lineage2 1
lineage2.2.1.1 2
lineage4.1.1 2
lineage4.9;lineage1.1 1
lineage1.2.1.2 1
lineage4.9;lineage4.6.3 1
lineage3.1.2.1 1
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 188
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4817554 Other lineage1.1.1 None
ERR2446509 Other lineage3 nl
SRR5074294 Sensitive lineage4.4.1.1 None
ERR4820723 RR-TB lineage4.4.1.1 None
SAMEA3501070 RR-TB lineage4.8 None
ERR4820193 Other lineage3 None
SAMEA3501067 RR-TB lineage4.8 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4820833 HR-TB None
ERR4820130 Other lineage3 None
SRR5341470 HR-TB None
SAMEA3501052 RR-TB lineage4.8 None
SRR6045496 Other lineage6.1.3 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045555 HR-TB None
SRR6045642 Other lineage3.1.2.2 None
SRR6045664 Other lineage4.2.1 None
SRR6046141 Other lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR5818394 Other lineage4.9 None
SRR5818389 Other lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR5818400 Other lineage4.9 None
SRR5818396 Other lineage4.9 None
SRR5818406 Other lineage4.9 None
SRR5818408 Other lineage4.9 None
SRR5818414 Other lineage4.9 None
SRR5818415 Sensitive lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR5818428 Sensitive lineage4.9 None
SRR5818452 Other lineage4.9 None
SRR5818424 Sensitive lineage4.9 None
SRR5818442 Other lineage4.9 None
SRR5818425 Other lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR5818455 Sensitive lineage4.9 None
SRR5818470 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6046133 HR-TB None
SRR5818459 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR5818463 Sensitive lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045267 RR-TB lineage4 None
SRR6046397 Other None
SRR6046737 Other lineage4.9 None
SRR6046442 Other lineage3 None
SRR6046644 HR-TB None
SRR6832644 Other lineage4.3.3 None
SRR6046860 Other lineage4.4.1.1 None
ERR2503533 Other lineage4.1.2.1 fi
SRR6982239 HR-TB lineage4.1.1.3 None
ERR502470 RR-TB lineage4.9 None
SRR6982246 Sensitive lineage4 None
SRR6807744 Sensitive lineage4.3.3 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR502524 HR-TB La2 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
ERR323053 HR-TB None
ERR323039 HR-TB None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR323056 HR-TB lineage4.4.1.2 None
DRR034348 Other lineage2.2.1 None
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR3797036 HR-TB None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4553673 MDR-TB lineage4.8 None
ERR4769419 Other lineage4.9 None
ERR405209 Sensitive lineage4 None
ERR4178161 Other lineage4.4.1.1 None
ERR4769418 Other La1.2 None
ERR4769495 Other La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR2514215 Other lineage2.2.1 gb
ERR4798648 HR-TB lineage3.1.2 None
ERR6197022 Other lineage4.9 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR5979789 Other lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR5866420 MDR-TB lineage2.2.1 None
ERR9786076 Sensitive lineage3 None
ERR6197043 MDR-TB lineage4.3.4.2 None
ERR6358951 HR-TB lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6865446 Other lineage4.4.1.1 None
ERR736835 HR-TB None
ERR736865 HR-TB None
SRR26936983 MDR-TB lineage2.2.1 None
ERR7801175 RR-TB lineage4.6.5 None
ERR7801176 RR-TB lineage4.6.5 None
ERR9787336 Other lineage6 None
ERR987722 HR-TB None
SRR1172310 HR-TB None
SRR10315751 MDR-TB lineage4.8 None
SRR1172214 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1172807 Sensitive lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1174897 HR-TB None
SRR1175487 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1180148 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181214 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1184021 Sensitive lineage4.9 None
SRR16370694 Sensitive lineage4.1.1 None
SRR12199457 Sensitive lineage4.9;lineage1.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR17832802 HR-TB lineage3 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR19233762 Sensitive lineage4.1.1 None
SRR21658550 Other lineage1.1.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR21240055 Other lineage4.1.2.1 None
SRR22424765 MDR-TB lineage4 None
SRR6207283 Sensitive lineage4.3.3 None
SRR22424884 Pre-XDR-TB lineage2.2.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR26937107 MDR-TB lineage2.2.1 None
SAMEA3501065 RR-TB lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
ERR4815550 Other lineage4 None
ERR4814976 Other lineage4.9 None
ERR4815310 Other None
SRR3675312 HR-TB lineage4 None
SRR5818386 Other None
SAMEA3501015 Other lineage4.8 None
ERR4816001 Other lineage3 None
ERR4816184 Other lineage4.1.2.1 None
ERR4816322 Other lineage4.9 None
ERR4816656 HR-TB None
ERR176740 HR-TB None
SRR3675571 HR-TB None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816852 Other lineage4.9 None
ERR4817434 Other lineage3 None
ERR4816868 Other lineage4.4.1.1 None
ERR3275190 Other lineage3 nl
SAMEA3450033 Other lineage4.8 None
ERR4818952 Other lineage3 None
ERR4818831 Other lineage3 None
ERR4818261 Other lineage1.1.2 None
ERR4818929 HR-TB None
SAMEA3501063 RR-TB lineage4.8 None