EBG00000313325 - n.616G>C


Drug resistance types
40 Sensitive 20 RR-TB 25 HR-TB 10 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 68 Other
lineage Counts
lineage Count
lineage4.9 62
lineage2.2.1 10
lineage4.8 34
lineage4.4.1.1.1 2
lineage6.1.3 1
La1.8.1 4
lineage4.9;lineage9 2
lineage4.1.2.1 3
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.4.1 2
La1.7;lineage4.9 1
lineage2.2.1.1 2
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 1
lineage4.4.1.1 2
M.canetti;lineage4.2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.2.2.2 1
lineage3.1.2.1 1
lineage4.1.1.3 1
lineage4.6.5 2
La2;lineage4.9 1
lineage2.2.1;lineage4 1
lineage2.2;lineage4.9 1
lineage3 6
lineage4.8.1 1
La1.7;lineage3.1;lineage4 1
La1.3 1
lineage3.1.2.2 1
lineage2.2.1;lineage4.5 1
lineage4 2
lineage4.4.1.2 1
lineage4.1.2;lineage4.9 1
lineage2.2.1;lineage4.9 2
lineage4.2;lineage4.9 1
lineage1.1.1 1
lineage4.3.4.2.1 3
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage1.2.1.2 1
lineage4.6.3;lineage4.9 1
La1.2 1
spoligotype Counts
spoligotype Count
None 167
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR7069922 Other lineage2.2.1 None
ERR911929_ERR911930 Other lineage4.8 None
SRR5818414 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR9787336 RR-TB lineage6.1.3 None
ERR978756 Other lineage4.8 None
SRR5818394 Other lineage4.9 None
SRR7617847 Other La1.8.1 None
SAMEA3501015 Other lineage4.8 None
SRR5818400 Other lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR5818399 Sensitive lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SAMEA3450033 Other lineage4.8 None
SRR1180319 Sensitive lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR5818425 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
SRR5818398 Other lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
DRR034348 Other lineage2.2.1 None
SAMEA3501052 RR-TB lineage4.8 None
SAMEA3501046 RR-TB lineage4.8 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR18003031 HR-TB lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR5818389 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR21240055 Other lineage4.1.2.1 None
ERR4816868 Other lineage4.4.1.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR978761 Other lineage4.8 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
SRR7236399 Other La1.8.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR7069931 Other lineage4.2.2.2 None
SRR1180391 Sensitive lineage4.9 None
ERR978694_ERR978693 Other lineage4.8 None
SRR22424765 HR-TB lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR5818415 Sensitive lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
ERR323039 HR-TB La2;lineage4.9 None
SRR7236374 Other La1.8.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR978752 Other lineage4.8 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR6045267 RR-TB lineage4.8 None
ERR2446509 Other lineage3 nl
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR9971150 RR-TB lineage4.8.1 None
ERR978762 Other lineage4.8 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR10315751 MDR-TB lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR1180420 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6045219 HR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR4769495 Other La1.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR911930 Other lineage4.8 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR5818464 Other lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4820193 Other lineage3 None
ERR4816478 HR-TB lineage4 None
ERR978747 Other lineage4.8 None
SRR7236330 Other La1.8.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR911929 Other lineage4.8 None
ERR2514215 Other lineage2.2.1 gb
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978735 Other lineage4.8 None
SRR1180413 Sensitive lineage4.9 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SRR6982246 Sensitive lineage4.1.2;lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR26936983 MDR-TB lineage2.2.1 None
SRR5818452 Other lineage4.9 None
ERR978694 Other lineage4.8 None
SRR5818424 Sensitive lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR5818428 Sensitive lineage4.9 None
SRR5818455 Sensitive lineage4.9 None
SRR5818470 Other lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR2503533 Other lineage4.1.2.1 fi
SRR5818459 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR18909918 Other lineage2.2.1.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR21658550 Other lineage1.1.1 None
SRR1175487 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR978748 Other lineage4.8 None
SRR5818386 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR20969475 Other lineage1.2.1.2 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4817731 HR-TB lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR4818831 Other lineage3 None
SRR1175512 Sensitive lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR1183111 HR-TB lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR5818408 Other lineage4.9 None
SRR1183144 Other lineage2.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SAMEA3501070 RR-TB lineage4.8 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR978757 RR-TB lineage4.8 None
ERR4769442 Sensitive lineage4.9 None
ERR4769418 Other La1.2 None
ERR9786076 Sensitive lineage3 None
ERR978734 RR-TB lineage4.8 None
SRR1180355 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR7069391 Other lineage4.9 None
SRR12420628 MDR-TB lineage2.2.1 None
SRR1180312 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR978727 Other lineage4.8 None
SRR6046141 Other lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3275190 Other lineage3 nl
ERR978751 Other lineage4.8 None
ERR4819241 Other lineage4.9 None
SAMEA3501063 RR-TB lineage4.8 None
SRR1181325 Sensitive lineage4.9 None
ERR978755 RR-TB lineage4.8 None