EBG00000313339 - n.2951C>T
Drug resistance types
47 Sensitive
5 RR-TB
17 HR-TB
6 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 53 |
| lineage4.3.3 | 2 |
| lineage2;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3 | 4 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 9 |
| La1.7;lineage4.9 | 3 |
| lineage1.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| La1.8.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.8.1 | 1 |
| lineage4.8 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045832 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR17567930 | Sensitive | lineage4.4.1.1 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR176741 | Other | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR4821054 | Sensitive | lineage3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR7496471 | Sensitive | lineage4 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR867566 | Other | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1181214 | Other | lineage4.9 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR736831 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None |
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