Rv3596c - c.270G>C
Drug resistance types
8 Sensitive
4 RR-TB
23 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 19 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;lineage4.9 | 5 |
| lineage2.2.1 | 5 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.2.2.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.8 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176651 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR6044835 | Other | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR5341456 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR181887 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
|---|
