lineage | Count |
---|---|
lineage4.9 | 38 |
lineage2.2.1 | 4 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage2.2.1.1 | 1 |
27 | |
lineage4.8 | 3 |
lineage4 | 11 |
lineage4.9.1 | 1 |
lineage4.8.1 | 1 |
La1 | 1 |
La1.7.X-unk4 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.4 | 1 |
spoligotype | Count |
---|---|
None | 94 |
ID | Drug resistance | Lineage | Country iso2 | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | SRR8692905 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR181824 | HR-TB | lineage4 | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR5341456 | Other | None | ERR2228868 | Sensitive | lineage4.8 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323045 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3283047 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797048 | HR-TB | None | SRR1172717 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None |
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