Rv3596c - c.1632C>T
Drug resistance types
71 Sensitive
7 RR-TB
40 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 96 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| La3;lineage4.9 | 8 |
| lineage4.1.1.2 | 1 |
| lineage3 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.1.2.1 | 3 |
| M.canetti;lineage1 | 1 |
| lineage6 | 1 |
| lineage2.2.1 | 11 |
| La1;lineage4.9 | 1 |
| lineage2.2.1.1 | 4 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 4 |
| La3;lineage4 | 1 |
| lineage4.3.4.2.1 | 3 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4 | 2 |
| lineage4.8 | 2 |
| lineage4.2.1 | 2 |
| La1.7.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1.1 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| lineage4.7 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 165 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR473323 | HR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR2513259 | Other | lineage3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR9787030 | Sensitive | lineage6 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR29096659 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6046141 | Other | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None |
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