lineage | Count |
---|---|
lineage2.2.1 | 4 |
La2 | 1 |
lineage4.4.2 | 2 |
lineage4.3.3 | 1 |
lineage4.1.1.3 | 4 |
2 | |
lineage4.6.2.2 | 2 |
lineage4.1 | 1 |
lineage4.8 | 1 |
lineage3 | 2 |
lineage4.9 | 7 |
lineage6.3.1 | 1 |
lineage4.3.4.2 | 2 |
lineage4.2.2.2 | 1 |
lineage4.1.2.1 | 2 |
lineage4.3.1.1 | 1 |
La1.8.1 | 2 |
La1.7.1 | 1 |
lineage4.2.1.1 | 1 |
lineage4 | 2 |
lineage4.1.1 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | SRR19303931 | Other | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR2100497 | Sensitive | lineage4.1.1.3 | None | SRR5485437 | Other | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR5485399 | Sensitive | None | ERR4814554 | Other | lineage4.1 | None | ERR228135 | Sensitive | lineage4.1.1.3 | None | ERR4818671 | Other | lineage4.8 | gb | ERR4816103 | Sensitive | lineage3 | gb | ERR4817248 | Other | lineage4.6.2.2 | gb | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4818116 | Other | lineage4.3.4.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821586 | Sensitive | lineage4.3.1.1 | gb | ERR4820891 | Other | lineage4.9 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045288 | Other | lineage3 | gb | ERR2815606 | Other | La1.7.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR11044913 | Sensitive | lineage4.1.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR3283043 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR4187652 | Other | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None |
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