lineage | Count |
---|---|
lineage4 | 13 |
lineage3 | 9 |
lineage2.2.1 | 14 |
lineage3.1.1 | 1 |
lineage4.9 | 33 |
La1.3 | 6 |
lineage4.9;La1.3 | 1 |
lineage2.2.2 | 1 |
6 | |
lineage4.3.3 | 1 |
lineage5.1.1 | 2 |
lineage4.1.1.3 | 2 |
lineage4.6.2.2 | 1 |
La1.8.1 | 2 |
lineage4.8 | 4 |
lineage4.2.1 | 1 |
lineage2.2 | 1 |
lineage3.1.3 | 1 |
lineage4;lineage2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage1.1.1 | 1 |
lineage4.5 | 1 |
lineage4.7 | 1 |
lineage4.1 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 107 |
ID | Drug resistance | Lineage | Country iso2 | ERR4596910 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR6358979 | Other | None | ERR6359069 | Other | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1173740 | Other | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | ERR1750907 | RR-TB | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4815550 | Other | lineage4 | None | ERR4815079 | RR-TB | lineage3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4816964 | Other | lineage4.9 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819910 | Other | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6789628 | HR-TB | lineage4.9 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7496471 | Sensitive | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3439441 | Other | La1.8.1 | None |
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