EBG00000313339 - n.1998T>A
Drug resistance types
42 Sensitive
10 RR-TB
12 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 56 |
| lineage4.4.1.1.1 | 2 |
| lineage6.1.3 | 1 |
| La1.8.1 | 1 |
| lineage4.8 | 3 |
| lineage4.8.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4 | 3 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| 1 | |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La1.6 | 1 |
| lineage3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 88 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2851356 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR11462861 | Other | La1.8.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR176741 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None |
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