EBG00000313339 - n.1998T>A
Drug resistance types
43 Sensitive
14 RR-TB
18 HR-TB
9 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 62 |
| lineage4 | 13 |
| 4 | |
| lineage2.2.1 | 3 |
| lineage4.1.2.1 | 3 |
| lineage1.1.1.1 | 1 |
| lineage4.8 | 4 |
| lineage6 | 1 |
| lineage3 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| La1.8.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| lineage1.1.1 | 2 |
| lineage1.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.7 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 117 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR473303 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9787336 | Other | lineage6 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140736 | RR-TB | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR1750907 | RR-TB | None | ERR4815815 | Sensitive | lineage4 | None | ERR1750908 | Sensitive | lineage4 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4814948 | Sensitive | lineage3.1.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818561 | HR-TB | lineage4 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819462 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR7496471 | Sensitive | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR067712 | HR-TB | lineage4 | None | DRR185024 | Other | lineage2.2.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR1063855 | Other | lineage4 | None |
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