Rv0668 - c.951C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
66 Sensitive
8 RR-TB
29 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 86 |
| La1.7;lineage4.9 | 4 |
| La1.7.1;lineage4.9 | 1 |
| La1.8.1 | 2 |
| La3;lineage4.9 | 13 |
| lineage2.2.1 | 7 |
| 1 | |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La3;lineage4 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.7 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2.2.1.1 | 4 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.1 | 2 |
| La1.2.BCG | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4 | 1 |
| lineage4.9.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage6 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 152 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR926163 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR176751 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR3283028 | Other | La3;lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR1181251 | Other | lineage2.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6045347 | Other | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR176557 | Sensitive | lineage4.3.4.1 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9787030 | Sensitive | lineage6 | None | SRR10315751 | MDR-TB | lineage4.8 | None |
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