Rv0667 - p.Ser441Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
69 RR-TB
0 HR-TB
32 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 23 |
| lineage4.9 | 17 |
| lineage4.2.1 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1.3 | 4 |
| lineage4.1.1.1 | 4 |
| lineage4.8 | 12 |
| lineage4.1.2 | 3 |
| lineage8 | 2 |
| lineage4.3.3 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4.2.2 | 4 |
| lineage4.8.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3 | 5 |
| lineage4.1.2.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.3.4.2 | 3 |
| lineage1.1.3.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.3 | 1 |
| lineage4.4.2 | 1 |
| La1.6 | 1 |
| lineage4.4 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| 1 | |
| lineage4.8.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.1 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| La1.8.1 | 1 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 114 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR29273723 | RR-TB | lineage4.1.2 | None | SRR12420367 | MDR-TB | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR1173725 | MDR-TB | lineage8 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR25389482 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | DRR130195 | MDR-TB | lineage4.2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR13254143 | MDR-TB | lineage4.2.2 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4800203 | RR-TB | lineage1.1.2 | in | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4815556 | RR-TB | lineage3 | None | ERR752199 | Pre-XDR-TB | lineage2.2.1 | th | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | SAMN02567762 | MDR-TB | lineage8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | SRR29273869 | RR-TB | lineage4.1.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR867567 | RR-TB | lineage3 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR4822354 | MDR-TB | lineage4.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR867570 | RR-TB | lineage4.9 | None | DRR130150 | MDR-TB | lineage4.2.2 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR25389481 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR25389483 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR3324368 | RR-TB | lineage1.1.2 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR25389484 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None |
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