EBG00000313339 - n.1404delC
Drug resistance types
42 Sensitive
6 RR-TB
21 HR-TB
5 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 59 |
| lineage4.4.1.1.1 | 2 |
| lineage2;lineage4.9 | 1 |
| La1.3 | 3 |
| lineage4.8.1 | 1 |
| lineage2.2.1 | 6 |
| lineage4 | 2 |
| La1.4 | 1 |
| lineage2.2.1;lineage4.9 | 4 |
| lineage4.3.4.1 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| lineage4.8 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.2.1 | 4 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| La1.8.1 | 2 |
| lineage4.4.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR176741 | Other | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4769516 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None |
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