lineage | Count |
---|---|
lineage4.9 | 10 |
lineage4 | 2 |
lineage3.1.1 | 1 |
lineage4.4.2 | 1 |
lineage4.4.2;lineage4.2.2;lineage2.2.1 | 1 |
lineage2.2 | 2 |
1 | |
lineage3 | 1 |
lineage4.8 | 1 |
La1.8.1 | 1 |
lineage4.9;lineage4.2.1 | 1 |
lineage2.2.1 | 4 |
lineage6.2.3;lineage1.1.2 | 1 |
lineage4.1.1.3 | 2 |
lineage4.8;lineage4.3.3 | 3 |
lineage4.7 | 1 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 34 |
ID | Drug resistance | Lineage | Country iso2 | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR18002873 | Pre-XDR-TB | lineage4.4.2;lineage4.2.2;lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR1750907 | RR-TB | None | ERR4821276 | Other | lineage3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2229321 | Other | lineage4.8 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4187652 | Other | lineage4.9 | None | ERR5866380 | MDR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None |
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