Rv1630 - c.669C>T
Drug resistance types
48 Sensitive
39 RR-TB
69 HR-TB
37 MDR-TB
17 Pre-XDR-TB
0 XDR-TB
123 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 91 |
| lineage4.3.3 | 7 |
| 81 | |
| lineage2.2.1 | 16 |
| lineage2.2 | 7 |
| lineage5.2 | 2 |
| lineage4.1.2.1 | 17 |
| lineage4.7 | 2 |
| lineage4.3.4.2.1 | 6 |
| lineage4 | 21 |
| lineage3 | 10 |
| lineage4.4.1.2 | 1 |
| lineage4.8 | 14 |
| La1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4.1.3 | 2 |
| lineage2 | 4 |
| La1.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage6 | 1 |
| lineage6.1.3 | 1 |
| lineage6.3.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| La1.8.1 | 2 |
| La3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1 | 2 |
| La1.4 | 1 |
| lineage2.1 | 2 |
| lineage4.5 | 4 |
| lineage4.3 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8;La3 | 1 |
| lineage1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 333 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821172 | RR-TB | lineage4.9 | None | SRR6044911 | Sensitive | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046540 | HR-TB | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502532 | HR-TB | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6789626 | Other | None | SRR7496509 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR8217918 | HR-TB | None | SRR7496517 | Other | None | SRR7585435 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR7535086 | Other | None | ERR323043 | HR-TB | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR019855 | Other | lineage3 | None | ERR036207 | Other | lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR108471 | HR-TB | lineage4 | None | ERR11049020 | Other | lineage4.8 | None | ERR3283010 | Other | La1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3797069 | Other | None | ERR3283027 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283021 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR473332 | Other | lineage4 | None | ERR4407463 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4407452 | Sensitive | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798262 | HR-TB | La1 | None | ERR4800341 | Other | lineage3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR702406 | HR-TB | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1140736 | RR-TB | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1172234 | Other | None | SRR1172857 | MDR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172728 | MDR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173363 | HR-TB | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173740 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184294 | HR-TB | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184388 | Other | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196494 | MDR-TB | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR13837709 | Sensitive | lineage4.9 | None | SRR13837584 | Sensitive | lineage4.9 | None | SRR15368973 | Other | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1710057 | Other | lineage2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR22424765 | MDR-TB | lineage4 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969677 | HR-TB | lineage2 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR11081258 | Other | lineage4.8 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4815604 | HR-TB | None | SRR3086405 | MDR-TB | lineage4.3.3 | None | SRR3675465 | HR-TB | None | SRR3085323 | MDR-TB | lineage4.3.3 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3416776 | Other | lineage2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675221 | HR-TB | None | ERR4814700 | Other | lineage4.3.3 | None | SRR3675236 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR4815556 | RR-TB | lineage3 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815471 | Other | lineage4.9 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675311 | Other | None | ERR4815752 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR4816999 | Other | None | ERR2228998 | Sensitive | lineage4.8 | None | ERR2027263 | Other | lineage4 | None | ERR4816470 | Other | lineage3 | None | ERR212001 | HR-TB | None | ERR4817069 | RR-TB | None | ERR212033 | HR-TB | None | ERR4817060 | RR-TB | None | ERR2229152 | Sensitive | lineage4.8 | None | SRR3675572 | Other | None | SRR3742665 | HR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816585 | Other | lineage2.2 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816756 | RR-TB | None | ERR4816729 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228890 | Other | lineage4 | None | ERR4815815 | Sensitive | lineage4 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4819012 | Other | lineage1.1.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR7496472 | Other | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818126 | RR-TB | lineage1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR234659 | HR-TB | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007188 | Other | lineage4 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4818615 | Other | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819462 | Other | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819724 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR1023509 | Other | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4819932 | Other | lineage4.7 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4820107 | RR-TB | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821143 | RR-TB | lineage4.9 | None |
|---|
