Rv1630 - c.669C>T


Drug resistance types
42 Sensitive 32 RR-TB 37 HR-TB 26 MDR-TB 10 Pre-XDR-TB 3 XDR-TB 166 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 14
lineage4 3
lineage4.9 89
lineage2.1;lineage4.9;lineage6.3 9
24
La3;lineage4.8 2
lineage3 8
La3;lineage2.1;lineage4.9 3
lineage4.3.3 5
lineage4.1.1.3 2
lineage4.8 21
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 8
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
lineage2.2.1 17
lineage4.6.1.2 4
lineage2.2.2 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage3.1.1 1
lineage2.2.2;lineage4 1
lineage4.1.1.1 3
lineage4.9;lineage6.3 7
La1;lineage4.9 1
lineage3.1.1;lineage4.9 1
lineage4.1.3 2
La3 2
lineage2.1;lineage6.3 2
lineage3;lineage4 1
La3;lineage2.2.1 2
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.1.2.1 14
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.4.1.1 1
lineage4.6.1.1 1
lineage4.4.1.1.1 1
lineage6.3.1 1
La3;lineage2 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 5
La3;lineage1.1.2 1
lineage4.6.5 1
lineage2.2.1;lineage4 1
lineage2.2.1;lineage4.9 2
lineage2.2 1
lineage4.5 1
La3;lineage2.2.2 1
lineage4.3.2 1
lineage1.2.2.2 1
lineage5.2 2
lineage4.3.4.2.1 3
lineage4.4.1.2 1
lineage6.1.3 1
lineage4.6.2.2 1
La1.2 1
La1.2.BCG 1
M.canetti;lineage2.2 2
lineage4.7 2
lineage4.3.2.1 2
lineage4.1.2 1
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage1.1.2 1
lineage2;lineage4.9 1
lineage1.2.2 1
lineage4.8;lineage4.9 1
lineage2.2.1;lineage4.5 1
lineage3.1 1
La1.4 1
lineage2;lineage4 1
lineage4.6.3;lineage4.9 1
lineage4.3.4.2 1
La1.8.1 1
spoligotype Counts
spoligotype Count
None 316
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR1181325 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1180375 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR502474 RR-TB lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR978752 Other lineage4.8 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR1169249 Other lineage4.9 None
ERR978762 Other lineage4.8 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816999 Other None
SRR11342660 MDR-TB lineage2.2.1 None
ERR502479 RR-TB lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
SRR1181283 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR502473 RR-TB lineage4.9 None
SRR28119753 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
SRR29051093 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR23961542 Other La1;lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11049020 Other lineage4.8 None
ERR978767 RR-TB lineage4.8 None
SRR1172728 RR-TB La3 None
ERR978766 RR-TB lineage4.8 None
SRR8217918 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1180446 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR29050928 Other lineage4.9 None
SRR9971080 RR-TB lineage2.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR473334 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR1173281 Other lineage3 None
ERR9786421 Other lineage4.1.2.1 None
SRR1181256 Other lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1180406 Sensitive lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR1181403 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR20969677 HR-TB La3;lineage2 None
ERR502481 RR-TB lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1735596 RR-TB lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR7496517 Other None
SAMEA3501073 RR-TB lineage4.8 None
ERR4821172 RR-TB lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4816585 Other lineage2.2 None
ERR4769508 RR-TB lineage4.9 None
SRR15368973 Other lineage4.9 None
ERR4815604 Other None
SAMEA3501065 RR-TB lineage4.8 None
SRR1173384 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR10315751 MDR-TB lineage4.8 None
ERR4821704 Other lineage4.3.3 None
SRR26159043 Other lineage4.9 None
SRR6789626 Other None
ERR4816548 HR-TB lineage4.5 None
ERR9786617 Other lineage4.1.1.1 None
ERR4816470 HR-TB lineage3 None
ERR4797588 MDR-TB lineage3 None
ERR4819933 Sensitive lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
SRR12708392 Other lineage2.2.1 None
SRR29093909 Other lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR9117805 Other lineage4.3.2 None
SRR1196545 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR1165699 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4797201 Other lineage1.2.2.2 None
ERR4596910 Sensitive lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR28119777 Other lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR702406 Other lineage2.1 None
SRR3675549 Other lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787153 Other lineage6.1.3 None
ERR4407452 Other lineage3 None
ERR978735 Other lineage4.8 None
ERR9786645 Other lineage4.6.2.2 None
SRR23961549 Other La1.2 None
SRR1184294 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR502912 Other lineage2.2.1 None
ERR3797070 Other lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR1181402 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SAMEA3501067 RR-TB lineage4.8 None
SRR1184381 MDR-TB None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR11252664 Other lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
ERR4817069 RR-TB None
SRR28044634 Other lineage3 None
ERR978757 RR-TB lineage4.8 None
ERR212001 HR-TB None
ERR9787197 Other None
ERR4817060 Other None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR4819462 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180355 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR7496523 Other lineage4.7 None
SRR9971270 RR-TB lineage2.2.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1173363 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4818347 Other lineage4.1.2 None
ERR4818615 Sensitive None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4407463 HR-TB None
SRR1172951 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4808964 RR-TB lineage2.2.1 None
SRR3675275 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR978765 RR-TB lineage4.8 None
SRR6044875 Sensitive lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1180440 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR3797069 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817204 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR1173218 Other lineage4.3.3 None
SRR1049672 Other lineage3 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1175487 Sensitive lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
ERR4818126 Other lineage1.2.2 None
SRR29051077 Other lineage4.9 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR6359069 Sensitive lineage4.9 None
ERR2228890 Other lineage4.8;lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR9786515 Other lineage4.1.2.1 None
SRR1184308 Sensitive lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR6785263 Sensitive lineage2.2.1 None
SRR3675236 Other None
SRR29017461 Other La3;lineage4.9 None
SRR7535086 Other None
ERR108471 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR9117709 Other None
SRR28119752 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1180413 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181351 Sensitive lineage4.9 None
SRR7496472 Other lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
SRR29097037 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR25827682 Other None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR1184372 MDR-TB None
SRR1180312 Sensitive lineage4.9 None
ERR9786604 Other None
SRR11462861 Other La1.8.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None