Rv3596c - c.1623C>T


Drug resistance types
77 Sensitive 2 RR-TB 32 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 33 Other
lineage Counts
lineage Count
lineage4.9 101
lineage2.2.1 8
lineage4.1;lineage4.9 1
lineage4.4.1.1.1 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
lineage4.1.2.1 4
lineage4.8 1
lineage4 3
lineage4.3.4.1 1
La1.8.1 2
M.canetti;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 3
lineage2.2.1;lineage4.9 2
lineage3 2
La1.7;lineage4.9 2
lineage4.3.4 1
lineage2;lineage4.9 1
lineage4.3.3 1
La2;lineage4.9 1
lineage1.1.1.1 1
La1.7.1;La1.7.X-unk4 1
lineage6.1.2 1
lineage4.3.4.2.1 2
1
lineage2.2.1;lineage4 1
lineage1;lineage4.9 1
La1.7.1;lineage4.9 1
lineage4.4.1.2 1
La1.2.BCG 1
spoligotype Counts
spoligotype Count
None 150
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283040 HR-TB lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
SRR6045359 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR3797080 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1062919 HR-TB lineage2.2.1 None
ERR9119669 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR1180420 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR176779 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR3797073 Other La1.8.1 None
ERR6358951 Sensitive lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR363445 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1238558 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR21733214 Sensitive lineage3 None
ERR4815815 Sensitive lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR1180312 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR1180444 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR6046210 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR1791747 Other La1.8.1 None
ERR926162 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR26399491 Sensitive lineage1.1.1.1 None
ERR181887 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR4819051 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR6359069 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR473334 HR-TB lineage4.9 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
ERR4769442 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1180355 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR4796577 HR-TB None
SRR1049674 HR-TB lineage2.2.1 None
ERR4769444 HR-TB lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR1180345 Other lineage4.9 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR6358979 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR926154 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1175512 Sensitive lineage4.9 None
SRR26399255 Sensitive lineage2.2.1 None
SRR1915485 Other La1.2.BCG None
ERR373946 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR1180410 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None