Rv3596c - c.759A>C
Drug resistance types
19 Sensitive
27 RR-TB
110 HR-TB
43 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
129 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 33 |
| lineage4.4.1.1 | 5 |
| 110 | |
| lineage2.2.1 | 31 |
| lineage3 | 7 |
| lineage4.9 | 45 |
| La2 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.1.3 | 4 |
| lineage4.1.2.1 | 13 |
| lineage4.7 | 2 |
| lineage4.8 | 9 |
| lineage4.2.1 | 1 |
| lineage2.2 | 3 |
| lineage4.3.4.1 | 1 |
| La1 | 1 |
| La1.8.1 | 5 |
| lineage4.1.3 | 2 |
| lineage2 | 3 |
| lineage4;lineage3.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| La1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.2 | 3 |
| lineage4.6.1.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.3.2 | 2 |
| lineage4.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6.3.1 | 1 |
| lineage6 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.3.2.1 | 1 |
| lineage3.1 | 2 |
| lineage4.4 | 1 |
| lineage2.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.5 | 2 |
| La1.7.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage2.2.1;La3 | 1 |
| lineage4.9;La3 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1;lineage1 | 1 |
| lineage4.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.1 | 2 |
| lineage4;lineage1.1 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 341 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046594 | HR-TB | lineage4 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046540 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046815 | Other | lineage3 | None | ERR323037 | HR-TB | lineage4 | None | ERR502532 | HR-TB | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6789626 | Other | None | ERR502524 | HR-TB | La2 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR7496517 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR7535086 | Other | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7585435 | Other | lineage4.9 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR323043 | HR-TB | None | ERR323039 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR323053 | HR-TB | None | ERR1034652 | Other | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063857 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None | ERR3283021 | HR-TB | None | ERR3283008 | Other | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283014 | HR-TB | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283036 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797069 | Other | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4188247 | HR-TB | None | ERR4407463 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR4769436 | Other | La1.3 | None | ERR4769521 | HR-TB | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800341 | Other | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6197036 | Other | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR702406 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9117709 | HR-TB | None | ERR9786569 | Other | lineage4.8 | None | ERR9119669 | HR-TB | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786604 | Other | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9787197 | Other | None | ERR987722 | HR-TB | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR11462861 | Other | La1.8.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172310 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172817 | HR-TB | None | SRR1173118 | Other | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173400 | Other | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173153 | HR-TB | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1175090 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1180440 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR13888750 | Other | La2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1710057 | Other | lineage2.1 | None | SRR17658565 | Other | lineage3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR25827682 | Other | None | SRR22424765 | MDR-TB | lineage4 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR21469201 | Other | La1.7.1 | None | ERR11081257 | Other | lineage4.8 | None | SRR8692905 | HR-TB | None | SRR8692825 | Other | lineage4.9 | None | SRR8692899 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675465 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR4815604 | HR-TB | None | ERR4815310 | Other | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675311 | Other | None | ERR4815550 | Other | lineage4 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4816999 | Other | None | ERR4815752 | Other | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR176740 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR4817060 | RR-TB | None | ERR4817037 | Other | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4816322 | Other | lineage4.9 | None | SRR3742665 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3675572 | Other | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2432997 | Other | lineage4.8 | None | ERR234659 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818308 | Sensitive | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4819051 | Other | lineage4 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5007188 | Other | lineage4 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819280 | Sensitive | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341313 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341315 | Sensitive | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045555 | HR-TB | None | SRR6046151 | Sensitive | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045526 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045327 | HR-TB | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046225 | HR-TB | None | SRR6045399 | Other | None | SRR6046305 | Other | lineage4.9 | None | ERR1213930 | Other | lineage4.3.2 | pe |
|---|
