EBG00000313325 - n.1028C>T
Drug resistance types
28 Sensitive
21 RR-TB
18 HR-TB
9 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 35 |
| lineage3 | 7 |
| lineage4.8 | 36 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage2.2.2 | 2 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 14 |
| La1.3 | 3 |
| La1.4 | 1 |
| lineage4.3.3 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| La1.7.1 | 5 |
| lineage4.5 | 2 |
| lineage4 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4.2 | 3 |
| lineage4.7 | 1 |
| La1.6 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.2.2.2 | 1 |
| 1 | |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 136 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR216965 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR323037 | Other | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | ERR911929 | Other | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | SRR16278274 | Other | La1.4 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR3275190 | Other | lineage3 | nl | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR10796560 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4819357 | Sensitive | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR2513259 | Other | lineage3 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4.9 | None | SRR7240479 | Other | La1.7.1 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR12708392 | Other | lineage2.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR867566 | Other | lineage4.9 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR4820484 | Sensitive | lineage4.8 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1792073 | Other | La1.7.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR978694 | Other | lineage4.8 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR978761 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4816470 | HR-TB | lineage3 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | SRR5818464 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR7236131 | Other | La1.7.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR14001966 | Other | La1.7.1 | None | ERR736831 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR11043155 | Other | La1.7.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR7069391 | Other | lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR4796577 | HR-TB | None | ERR978755 | RR-TB | lineage4.8 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR978756 | Other | lineage4.8 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | DRR184982 | Other | lineage2.2.1 | None | ERR978752 | Other | lineage4.8 | None | ERR4769408 | Other | La1.3 | None |
|---|
