EBG00000313325 - n.1016G>C
Drug resistance types
63 Sensitive
9 RR-TB
16 HR-TB
11 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 15 |
| La1.8.1 | 5 |
| La1.7.1 | 2 |
| lineage4.3.2.1 | 11 |
| lineage4.1.1.2 | 2 |
| lineage4.1.1 | 7 |
| lineage4.8 | 3 |
| lineage1.1.3.2 | 2 |
| lineage4.9 | 20 |
| lineage4.4.1.1 | 5 |
| lineage4 | 7 |
| lineage4.3.3 | 5 |
| lineage2.2.1 | 13 |
| 6 | |
| lineage4.6.4 | 1 |
| lineage4.1.2.1 | 5 |
| lineage3 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage2.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.4 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage3.1.1 | 2 |
| lineage4.4.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3 | 1 |
| lineage4;lineage2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 1 |
| La1.6 | 2 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 140 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16058250 | Sensitive | lineage4.5 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792140 | Other | La1.8.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR2101498 | Sensitive | lineage4.1.1.2 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR21277011 | HR-TB | lineage4 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | SAMN02360605 | Sensitive | lineage4.5 | kr | ERR1577252 | HR-TB | lineage2.2.1 | None | ERR4815310 | Other | None | ERR1679641 | Other | lineage4.6.4 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR4818265 | Other | lineage4.1.2.1 | None | SRR3675555 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2515662 | Other | lineage2.2.1 | za | ERR4819357 | Other | lineage4.9 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | ERR2515854 | Sensitive | lineage2.2.1 | None | SAMN02360585 | HR-TB | lineage4.5 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR6856094 | Other | lineage2.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6856087 | Sensitive | lineage4 | None | SRR671763 | Sensitive | lineage4.5 | cn | SRR6896162 | Sensitive | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR671833 | Sensitive | lineage4.5 | cn | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6981912 | Sensitive | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6981962 | Sensitive | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982070 | RR-TB | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | DRR185024 | Other | lineage2.2.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3439441 | Other | La1.8.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR3806453 | Other | lineage4.3.4.2 | None | ERR387051 | HR-TB | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4810827 | Sensitive | lineage4.5 | cn | ERR9786844 | Other | lineage4.3.4.2 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR9125901 | Sensitive | lineage4.5 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013611 | HR-TB | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1013652 | Sensitive | lineage4.5 | None | SRR1013653 | Sensitive | lineage4.5 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1049049 | Sensitive | lineage4.5 | None | SRR10993936 | Other | La1.6 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1049048 | Sensitive | lineage4.5 | None | SRR11294512 | Other | La1.8.1 | None | SRR13199734 | Other | La1.2 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR15315869 | MDR-TB | lineage4.5 | None | SRR15316481 | Pre-XDR-TB | lineage4.5 | None |
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