Rv3596c - c.775_776delAGinsTC
Drug resistance types
5 Sensitive
9 RR-TB
5 HR-TB
15 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2;lineage4 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.6.1.2 | 4 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 9 |
| lineage4.3.3;lineage4.8 | 3 |
| lineage4.8 | 4 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.9 | 14 |
| lineage4.4.1.2 | 1 |
| lineage2.2.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.2.1 | 1 |
| lineage3 | 2 |
| lineage4.3 | 1 |
| La2 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR6044952 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1181256 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR2229198 | Sensitive | lineage4.8 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | DRR185024 | Other | lineage2.2.2 | None | SRR1180446 | Other | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None |
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