Rv3596c - c.775_776delAGinsTC
Drug resistance types
3 Sensitive
16 RR-TB
9 HR-TB
26 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.1.2 | 5 |
| lineage4.3.2.1 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage2.2.1 | 13 |
| lineage4.9 | 26 |
| lineage4 | 6 |
| La2 | 1 |
| lineage3 | 2 |
| 4 | |
| La1.4 | 1 |
| lineage2.2.2 | 2 |
| lineage4.4.1.1 | 2 |
| La1.7.1 | 1 |
| lineage4.8 | 3 |
| lineage4.1.2.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage5.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR13861322 | Other | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR17658565 | Other | lineage3 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16278274 | Other | La1.4 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR21469201 | Other | La1.7.1 | None | ERR4815550 | Other | lineage4 | None | ERR4815310 | Other | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4818607 | Sensitive | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6045399 | Other | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR9786617 | Other | lineage4.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None |
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