Rv0668 - c.334_336delTCGinsAGC
Drug resistance types
19 Sensitive
17 RR-TB
21 HR-TB
19 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8.1 | 1 |
| lineage4.9 | 35 |
| lineage4.8 | 1 |
| La3;lineage4.9 | 4 |
| lineage4 | 2 |
| lineage3 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| La2;lineage4.9 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage9 | 3 |
| lineage4.1.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.1.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.2.1 | 8 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage6.1.1 | 2 |
| La2;lineage2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.7 | 1 |
| 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046839 | Other | lineage4.9 | None | SRR26936983 | MDR-TB | lineage2.2.1 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR4796577 | HR-TB | None | ERR987722 | MDR-TB | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None |
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