Rv0668 - c.334_336delTCGinsAGC
Drug resistance types
39 Sensitive
9 RR-TB
42 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 51 |
| 24 | |
| lineage4 | 9 |
| lineage3 | 4 |
| lineage4.1.2.1 | 2 |
| La2 | 2 |
| lineage2.2.1 | 15 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 3 |
| lineage6.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.4.2 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 136 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046133 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046376 | Other | lineage3 | None | SRR6046397 | Other | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | ERR502524 | HR-TB | La2 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR323039 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769521 | HR-TB | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4796577 | MDR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736865 | HR-TB | None | SRR26936983 | MDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9787030 | Sensitive | lineage6 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173740 | Other | None | SRR1173281 | RR-TB | lineage3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4815471 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176740 | HR-TB | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR4816964 | Other | lineage4.9 | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | ERR212033 | HR-TB | None | ERR4816470 | Other | lineage3 | None | SRR3675571 | HR-TB | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341222 | Sensitive | lineage3.1 | None |
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