Rv3596c - c.168G>C
Drug resistance types
36 Sensitive
7 RR-TB
113 HR-TB
12 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
97 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 4 |
| 111 | |
| lineage2 | 3 |
| lineage4.9 | 57 |
| lineage4 | 20 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.9;La3 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage2.2.1 | 10 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage3 | 7 |
| La1.8.1 | 2 |
| lineage4.1.2.1 | 10 |
| lineage4;lineage1.1 | 1 |
| La2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.3 | 2 |
| lineage6.1.1 | 2 |
| La1.3 | 5 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4 | 1 |
| lineage1.1.2 | 2 |
| lineage4.8 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 271 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18910194 | HR-TB | lineage2.2 | None | SRR25827682 | Other | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR8692898 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR8692905 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692887 | Other | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26159043 | Other | lineage4.9 | None | ERR176751 | HR-TB | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3675221 | HR-TB | None | ERR176778 | HR-TB | None | ERR4815604 | HR-TB | None | ERR176779 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR4814331 | Sensitive | lineage4.9 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675236 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | ERR176740 | HR-TB | None | SRR3675311 | Other | None | ERR181887 | HR-TB | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | ERR4816999 | Other | None | ERR4816964 | Other | lineage4.9 | None | SRR3675510 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4816466 | HR-TB | None | SRR3675572 | Other | None | SRR3675571 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR212138 | HR-TB | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR6045503 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | SRR5007188 | Other | lineage4 | None | ERR4818615 | Other | None | SRR5341373 | HR-TB | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341313 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341470 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341302 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR6045526 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR294266 | HR-TB | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6789626 | Other | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7496517 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1063862 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797069 | Other | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4407463 | HR-TB | None | ERR4769506 | Sensitive | La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4798504 | Other | lineage3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358991 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR6359045 | HR-TB | None | ERR702404 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736867 | HR-TB | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786604 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR987722 | HR-TB | None | ERR9787197 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR990545 | Other | lineage3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1172234 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172728 | MDR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172951 | Other | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173400 | Other | None | SRR1173118 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173153 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196566 | HR-TB | None | SRR17832802 | HR-TB | lineage3 | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR12416824 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None |
|---|
