EBG00000313339 - n.187C>T
Drug resistance types
62 Sensitive
12 RR-TB
26 HR-TB
16 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 79 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage4.4.1.1.1 | 2 |
| lineage2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.2.2.1 | 1 |
| lineage2.2.1 | 21 |
| lineage4.6.2.2 | 2 |
| lineage4 | 11 |
| lineage1.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3 | 12 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4.8 | 3 |
| La3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.7 | 2 |
| 3 | |
| lineage4.6.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.8.1 | 1 |
| La1.8.1 | 4 |
| La1.3 | 8 |
| lineage4.9;La1.3 | 2 |
| lineage6 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 176 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | ERR4816964 | Other | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR4815079 | RR-TB | lineage3 | None | SRR1723460 | MDR-TB | lineage2.2.1 | cn | ERR4817016 | Sensitive | lineage3 | None | ERR4816470 | Other | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4817704 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR228175 | Sensitive | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4818536 | Other | lineage4.9 | None | ERR4818499 | Sensitive | lineage4.9 | None | SRR2100532 | Sensitive | lineage3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR4819462 | Other | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819952 | Sensitive | La3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045480 | Other | lineage4.1.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR4829495 | Sensitive | lineage4.3.3 | None | SRR6046839 | Other | lineage4.9 | None | ERR4798794 | Sensitive | lineage3.1.2.1 | in | SRR6855695 | Sensitive | lineage4.8 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR7496471 | Sensitive | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR036207 | Other | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4187652 | Other | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR3439441 | Other | La1.8.1 | None | ERR3439593 | Other | La1.8.1 | None | ERR4187884 | Other | La1.8.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769406 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR736837 | Other | lineage4.9 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None |
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