lineage | Count |
---|---|
lineage4.9 | 19 |
lineage4.3.2.1 | 2 |
La1.3 | 1 |
lineage4.8 | 8 |
lineage4.3.4.2.1 | 4 |
lineage1.1.1.1 | 1 |
lineage4.1.2.1;lineage4.9 | 1 |
lineage4.1.2.1;lineage4.4.1.1 | 1 |
lineage3.1.1 | 3 |
lineage3 | 6 |
lineage4.2.1 | 1 |
lineage2.2.1 | 4 |
lineage2.2;lineage4 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 2 |
lineage4.4.1.1 | 1 |
La1.6 | 1 |
lineage4.1.1.3 | 1 |
lineage3;lineage4 | 1 |
lineage2.2.1;lineage4.9 | 1 |
lineage4.1.2.1;lineage4.4.1 | 1 |
lineage4.6.2.2 | 1 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | ERR502478 | RR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR1140716 | Other | lineage3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR2229234 | Sensitive | lineage4.8 | None |
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