ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675214
|
Other
|
lineage4.9
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR4821276
|
Sensitive
|
lineage3
|
None
|
SRR1196677
|
Other
|
lineage2.2
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR4819322
|
Other
|
lineage1.1;lineage4
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR987707
|
MDR-TB
|
lineage4.7
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
SRR29093099
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR1180148
|
Sensitive
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
SRR29016901
|
Other
|
La3;lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
SRR29096900
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
SRR5341267
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR13267017
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR6785527
|
Sensitive
|
lineage2.2.1
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR11465353
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
ERR9786164
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4407452
|
Other
|
lineage3
|
None
|
SRR29050928
|
Other
|
lineage4.9
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9971080
|
RR-TB
|
lineage2.2.1
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
SRR14066533
|
Sensitive
|
lineage1.1.1
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR234659
|
Other
|
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR15600376
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675457
|
Other
|
lineage4.9
|
None
|
ERR4817915
|
Other
|
lineage4.9
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6785413
|
Other
|
lineage2.2.1
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR4797037
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR9029360
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR4817628
|
Sensitive
|
lineage4.8
|
gb
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
SRR6789626
|
Other
|
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29093909
|
Other
|
lineage4.9
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
ERR7821123
|
Other
|
lineage1.1.3.2
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
SRR6785268
|
Sensitive
|
lineage4.2.1
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR1062920
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
SRR7535047
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR126597
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR11068570
|
Other
|
lineage4
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
SRR29097037
|
Other
|
lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29096541
|
Other
|
lineage4.9
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR11466514
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR7496517
|
Other
|
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
ERR4816585
|
Other
|
lineage2.2
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4815604
|
Other
|
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
SRR29051077
|
Other
|
lineage4.9
|
None
|
ERR9786617
|
Other
|
lineage4.1.1.1
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28119753
|
Other
|
lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR13245558
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR11466174
|
Other
|
lineage4.8
|
None
|
SRR3675236
|
Other
|
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
ERR3797073
|
Other
|
La1.8.1
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
ERR12015083
|
Other
|
La3;lineage4.8
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
SRR8758877
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
SRR6045233
|
Other
|
M.canetti;lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR25827682
|
Other
|
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
SRR5341365
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR6046305
|
Sensitive
|
lineage4.9
|
None
|
ERR3470647
|
Other
|
lineage3
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|