Rv0668 - c.984G>C


Drug resistance types
51 Sensitive 14 RR-TB 44 HR-TB 19 MDR-TB 8 Pre-XDR-TB 1 XDR-TB 142 Other
lineage Counts
lineage Count
lineage4.9 93
lineage4.1.2.1 11
La1.7;lineage4.9 1
lineage2;lineage4.9 1
lineage1.2.1.2 1
lineage4.3.4.1 3
La3 2
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage4.9 14
lineage4.1.3 2
La1.7.X-unk4 1
lineage3 8
La3;lineage4.8 2
lineage2.2.1 10
La3;lineage2 1
lineage4.8 11
lineage1.2.2.2 2
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
La3;lineage2.2.1 1
lineage4.1.1.3 4
La1.4 1
lineage2.2.1;lineage4.9 3
lineage4.9;lineage6.3 6
lineage4.3.4.2.1 2
M.canetti;lineage4.9 2
lineage4.1.1.1 4
19
lineage4.4.1.1.1 2
lineage2.1;lineage4.9;lineage6.3 9
lineage2.1;lineage6.3 2
lineage1.1;lineage4 1
lineage1.1.1 2
lineage4 4
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1 5
lineage2.2.1;lineage4 1
lineage4.2.2.2 1
lineage4.3.3;lineage4.8 4
lineage4.4.1.1 2
lineage3.1.1 1
lineage1.1.3.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.4.1.2 2
lineage4.1.2 1
La1.2.BCG 1
lineage4.6.2.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.2 1
lineage6.3.1 1
lineage2.2.2 1
La3;lineage4.9 1
La3;lineage1.1.2 1
lineage2.2 1
lineage3.1.3 1
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
lineage4.2.1 1
La1.8.1 2
lineage4.3.3 1
lineage4.3.2.1 1
lineage6.1.3 1
La1;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3.1.2 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 279
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR22424787 Sensitive lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR502473 RR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR926163 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR11466514 Sensitive lineage4.3.4.1 None
SRR1172728 RR-TB La3 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR3445487 Other La1.7.X-unk4 None
ERR4821276 Sensitive lineage3 None
ERR11466499 Other lineage4.3.4.1 None
SRR3675457 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR11081258 Other lineage4.8 None
SRR12708392 Other lineage2.2.1 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR3283040 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180413 Sensitive lineage4.9 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
SRR16278274 Other La1.4 None
ERR473323 HR-TB lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
ERR234659 HR-TB None
SRR25827682 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR4800341 HR-TB lineage3 None
ERR4769530 RR-TB lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180420 Sensitive lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR926165 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR926156 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
ERR4819314 HR-TB lineage1.1.1 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR4816762 Sensitive lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR1180312 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR2513470 Other lineage4.2.2.2 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046521 Other lineage4.4.1.1 None
SRR1196474 Other lineage3.1.1 None
ERR7821123 Other lineage1.1.3.2 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180319 Sensitive lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4596910 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR9786694 Other lineage4.1.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9786601 Other lineage4.1.2.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR9786645 Other lineage4.6.2.2 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR4769442 Sensitive lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR7496509 Other None
ERR9786671 Other None
SRR1173363 Other None
SRR1184372 MDR-TB None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR3675275 Other lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR1180300 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR9787139 Other lineage6.3.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR6785413 Other lineage2.2.1 None
SRR1710057 Other lineage2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR3470647 Other lineage3 None
ERR3797069 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SAMEA3501073 RR-TB lineage4.8 None
SRR1196677 Other lineage2.2 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046305 Sensitive lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR4818561 Sensitive lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798823 HR-TB lineage4 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1181349 Sensitive lineage4 None
ERR4817628 Sensitive lineage4.8 gb
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR26159043 Other lineage4.9 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR926158 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4814639 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
SRR6785268 Sensitive lineage4.2.1 None
ERR5311077 Other La1.8.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR21732980 Other lineage4.3.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR3797073 Other La1.8.1 None
ERR11466174 Other lineage4.8 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR6044875 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4819546 HR-TB lineage3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR4769444 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6785527 Sensitive lineage2.2.1 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1196546 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR502470 RR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
ERR9787165 Other lineage6.1.3 None
ERR926155 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR4407452 Other lineage3 None
ERR4815815 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR926161 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR3675549 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR11465025 Other lineage4.1.1.3 None
ERR4817667 HR-TB lineage4.8 None
ERR702406 Other lineage2.1 None
ERR4596902 MDR-TB lineage3 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR6044942 HR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR926154 Sensitive lineage4.9 None
SRR15600376 HR-TB lineage2.2.1.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR1175487 Sensitive lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR10315751 MDR-TB lineage4.8 None
SRR12708414 HR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None