EBG00000313339 - n.2375C>G
Drug resistance types
53 Sensitive
17 RR-TB
27 HR-TB
14 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 61 |
| lineage4 | 19 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage2.2 | 2 |
| lineage4.2.2.1 | 1 |
| La1.8.1 | 6 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1.1 | 1 |
| La1.7.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.8 | 9 |
| 4 | |
| lineage4.5 | 1 |
| lineage4;lineage2 | 1 |
| lineage1.1.1 | 2 |
| lineage4.1.2 | 1 |
| lineage3 | 5 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 3 |
| lineage4.1.1.3 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage4.8.1 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 7 |
| lineage4.9;La1.3 | 3 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.1.1.2 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 156 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR1750908 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4815310 | Other | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR1750943 | Sensitive | lineage4 | None | ERR4815550 | Other | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR228175 | Sensitive | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | ERR4818831 | Other | lineage3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818561 | HR-TB | lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4819314 | Other | lineage1.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | ERR4819357 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4819933 | Other | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR11488437 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR036207 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR11488540 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3283040 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3797015 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4798823 | HR-TB | lineage4 | None | ERR5866451 | MDR-TB | lineage2.2 | None | ERR6197031 | Other | lineage4.7 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None |
|---|
