Rv3457c - c.546G>C
Drug resistance types
87 Sensitive
2 RR-TB
71 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 41 |
| 46 | |
| lineage4 | 65 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2.1 | 7 |
| La1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.1.2.1 | 8 |
| lineage3 | 3 |
| lineage1.1.2 | 2 |
| lineage2.2 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.1 | 2 |
| lineage4.8 | 2 |
| lineage6 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.2.2.1 | 1 |
| La1.7.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 198 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | ERR502532 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535086 | Other | None | ERR323043 | HR-TB | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR323045 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3283047 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359045 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR702406 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736867 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119669 | HR-TB | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | SRR10808805 | Sensitive | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR16149129 | MDR-TB | lineage4.2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR12416824 | HR-TB | None | SRR14801749 | Sensitive | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR8692800 | Other | lineage4 | None | SRR8692905 | HR-TB | None | ERR176751 | HR-TB | None | SRR8692825 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR181887 | HR-TB | None | SRR3675510 | Other | None | ERR212121 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816470 | Other | lineage3 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4816656 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4818929 | HR-TB | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR6044790 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6045480 | Other | lineage4.1.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045503 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046460 | HR-TB | None |
|---|
