Rv3596c - c.1824C>T
Drug resistance types
34 Sensitive
1 RR-TB
10 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 2 |
| lineage2.2.1 | 4 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| lineage4.9 | 38 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.1.1.3 | 1 |
| lineage2;lineage4 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.8 | 1 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 70 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR369151 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR926164 | Other | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR29097066 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3797029 | Other | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR12328189 | Sensitive | lineage2.2.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR3797085 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None |
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